RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 OPLAHO14841 1288 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 PER2O15055 1255 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 DGKIO75912 1065 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 FGAP02671 866 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 LGALS2P05162 132 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 HSPD1P10809 573 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 ICAM3P32942 547 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 HAND2P61296 217 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 AAMPQ13685 434 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 PTPN21Q16825 1174 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 QRICH1Q2TAL8 776 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 FAM26DQ5JW98 314 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 GPATCH4Q5T3I0 446 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 KLHL23Q8NBE8 558 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 PI4K2BQ8TCG2 481 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 POF1BQ8WVV4 589 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 TTC14Q96N46 770 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 PLVAPQ9BX97 442 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 DNAH14Q0VDD8 3507 aa16.02■□□□□ 0.16
SHKBP1-208ENST00000595726 GALR2O43603 387 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 CAND2O75155 1236 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 SP100P23497 879 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 ID4P47928 161 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 LPIN1Q14693 890 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 ERMP1Q7Z2K6 904 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 VSIG10LQ86VR7 867 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 TRIM50Q86XT4 487 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 RIPOR3Q96MK2 946 aa16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 MRPL11Q9Y3B7 192 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-208ENST00000595726 HOXA13P31271 388 aaPredicted RBP16■□□□□ 0.15
SHKBP1-208ENST00000595726 ADAM17P78536 824 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 ARHGAP4P98171 946 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 ALX1Q15699 326 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 PAN2Q504Q3 1202 aaKnown RBP16■□□□□ 0.15
SHKBP1-208ENST00000595726 RUFY4Q6ZNE9 571 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 VN1R2Q8NFZ6 395 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 P2RX5Q93086 422 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 MAF1Q9H063 256 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 TLE6Q9H808 572 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 EHMT1Q9H9B1 1298 aa16■□□□□ 0.15
SHKBP1-208ENST00000595726 TTC41PQ6P2S7 1318 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 DHX16O60231 1041 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 NBL1P41271 181 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 HSD17B4P51659 736 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 KCNV1Q6PIU1 500 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 FRMD5Q7Z6J6 570 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 ZBTB33Q86T24 672 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 RTN4RL1Q86UN2 441 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 TMEM105Q8N8V8 129 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 EXOC6Q8TAG9 804 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 LMBR1Q8WVP7 490 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 SUSD6Q92537 303 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 APOL5Q9BWW9 433 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 JMJD4Q9H9V9 463 aa15.99■□□□□ 0.15
SHKBP1-208ENST00000595726 GNAT1P11488 350 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 GATMP50440 423 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 PGM5Q15124 567 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 UTP14CQ5TAP6 766 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 STOX1Q6ZVD7 989 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 ADSSL1Q8N142 457 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 MICAL1Q8TDZ2 1067 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 SMOC2Q9H3U7 446 aa15.98■□□□□ 0.15
SHKBP1-208ENST00000595726 EPG5Q9HCE0 2579 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 NOP56O00567 594 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 TGFB3P10600 412 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 MX1P20591 662 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 MGAT3Q09327 533 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 CYFIP1Q7L576 1253 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 TBC1D10CQ8IV04 446 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 KREMEN2Q8NCW0 462 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 PNMA1Q8ND90 353 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 ATP8B4Q8TF62 1192 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 AGO3Q9H9G7 860 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-208ENST00000595726 PPP1R11O60927 126 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 ATF7P17544 494 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 SP4Q02446 784 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 FBXO47Q5MNV8 452 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 MFSD6Q6ZSS7 791 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 CRIPAKQ8N1N5 446 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 GPR20Q99678 358 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 S1PR5Q9H228 398 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 CDH22Q9UJ99 828 aa15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 EP300Q09472 2414 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-208ENST00000595726 NCOR2Q9Y618 2525 aa15.96■□□□□ 0.14
SHKBP1-208ENST00000595726 TTC3P53804 2025 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 CCDC171Q6TFL3 1326 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 BRD1O95696 1058 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms