RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 KCNMB3Q9NPA1 279 aa25.9■■□□□ 1.74
PNKP-205ENST00000595081 SCN10AQ9Y5Y9 1956 aa25.89■■□□□ 1.74
PNKP-205ENST00000595081 PSEN2P49810 448 aa25.89■■□□□ 1.74
PNKP-205ENST00000595081 CDK7P50613 346 aa25.89■■□□□ 1.74
PNKP-205ENST00000595081 TLE2Q04725 743 aa25.89■■□□□ 1.74
PNKP-205ENST00000595081 NBR1Q14596 966 aa25.89■■□□□ 1.74
PNKP-205ENST00000595081 MFSD10Q14728 455 aa25.89■■□□□ 1.74
PNKP-205ENST00000595081 PSMD10O75832 226 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 MCM7P33993 719 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 TOB1P50616 345 aaPredicted RBP25.88■■□□□ 1.73
PNKP-205ENST00000595081 ZNF174Q15697 407 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 KIAA0753Q2KHM9 967 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 FAM47CQ5HY64 1035 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 TTC38Q5R3I4 469 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 HAS1Q92839 578 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 PCYT2Q99447 389 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 TEKT3Q9BXF9 490 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 TCEAL9Q9UHQ7 104 aa25.88■■□□□ 1.73
PNKP-205ENST00000595081 NOL7Q9UMY1 257 aaKnown RBP25.88■■□□□ 1.73
PNKP-205ENST00000595081 H3BRB1 525 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 HAS3O00219 553 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 CHMP2AO43633 222 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 NEMFO60524 1076 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 KRT76Q01546 638 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 ZNF746Q6NUN9 644 aaPredicted RBP25.87■■□□□ 1.73
PNKP-205ENST00000595081 FERMT3Q86UX7 667 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 KATNAL1Q9BW62 490 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 UNC45AQ9H3U1 944 aa25.87■■□□□ 1.73
PNKP-205ENST00000595081 TUT1Q9H6E5 874 aaKnown RBP25.87■■□□□ 1.73
PNKP-205ENST00000595081 MARCH6O60337 910 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 LGR5O75473 907 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 ATG7O95352 703 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 TRAPPC10P48553 1259 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 CALCRLQ16602 461 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 ABHD15Q6UXT9 468 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 ANKRD33Q7Z3H0 272 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 GLG1Q92896 1179 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 FAM20AQ96MK3 541 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 PCDH10Q9P2E7 1040 aa25.86■■□□□ 1.73
PNKP-205ENST00000595081 PDE4DIPQ5VU43 2346 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 TBX3O15119 743 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 SUPT20HL2P0C7V6 817 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 MARK3P27448 753 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 NFRKBQ6P4R8 1299 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 FAM126BQ8IXS8 530 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 TMEM60Q9H2L4 133 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 ZNF215Q9UL58 517 aaPredicted RBP25.85■■□□□ 1.73
PNKP-205ENST00000595081 MTMR6Q9Y217 621 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 EMSYQ7Z589 1322 aa25.85■■□□□ 1.73
PNKP-205ENST00000595081 BECN1Q14457 450 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 MIS18BP1Q6P0N0 1132 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 CCDC60Q8IWA6 550 aaPredicted RBP25.84■■□□□ 1.73
PNKP-205ENST00000595081 SMAP1Q8IYB5 467 aaPredicted RBP25.84■■□□□ 1.73
PNKP-205ENST00000595081 TRPV6Q9H1D0 765 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 SMARCAD1Q9H4L7 1026 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 AZI2Q9H6S1 392 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 TRMT13Q9NUP7 481 aaKnown RBP25.84■■□□□ 1.73
PNKP-205ENST00000595081 HDAC6Q9UBN7 1215 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 VAV3Q9UKW4 847 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 SAMM50Q9Y512 469 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 PCDHB6Q9Y5E3 794 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 MROH7Q68CQ1 1323 aa25.84■■□□□ 1.73
PNKP-205ENST00000595081 IGKV6D-21A0A0A0MT36 114 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 DCDC2CA8MYV0 355 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 WDR64B1ANS9 1081 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 BACH1O14867 736 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 STX6O43752 255 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 B4GALT4O60513 344 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 BAG4O95429 457 aaKnown RBP25.83■■□□□ 1.73
PNKP-205ENST00000595081 FAAP100Q0VG06 881 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 B3GNT9Q6UX72 402 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 C7orf31Q8N865 590 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 TOX2Q96NM4 488 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 MTMR9Q96QG7 549 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 RNPEPQ9H4A4 650 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 DISC1Q9NRI5 854 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 ZMYND8Q9ULU4 1186 aaPredicted RBP25.83■■□□□ 1.73
PNKP-205ENST00000595081 PCDHA10Q9Y5I2 948 aa25.83■■□□□ 1.73
PNKP-205ENST00000595081 STAT5BP51692 787 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 SWSAP1Q6NVH7 229 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 SH3RF1Q7Z6J0 888 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 SLFN12Q8IYM2 578 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 SEZ6LQ9BYH1 1024 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 PRDM5Q9NQX1 630 aaPredicted RBP25.82■■□□□ 1.72
PNKP-205ENST00000595081 PDLIM7Q9NR12 457 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 ERAP1Q9NZ08 941 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 NR2E3Q9Y5X4 410 aa25.82■■□□□ 1.72
PNKP-205ENST00000595081 CD4P01730 458 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 PSAPP07602 524 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 CLTBP09497 229 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 SMIM10L2AP0DMW4 78 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 SMIM10L2BP0DMW5 78 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 SYN1P17600 705 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 JAK3P52333 1124 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 PTPN11Q06124 597 aaPredicted RBP25.81■■□□□ 1.72
PNKP-205ENST00000595081 RESTQ13127 1097 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 PPP2R5CQ13362 524 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 ORC2Q13416 577 aaPredicted RBP25.81■■□□□ 1.72
PNKP-205ENST00000595081 RILPL1Q5EBL4 403 aa25.81■■□□□ 1.72
PNKP-205ENST00000595081 GDF6Q6KF10 455 aaPredicted RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms