RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 EMSYQ7Z589 1322 aa26.84■■□□□ 1.89
LSM4-204ENST00000594828 CDH23Q9H251 3354 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 SCG2P13521 617 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 AP3B2Q13367 1082 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 IKBKEQ14164 716 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 MBTPS1Q14703 1052 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 CYP2W1Q8TAV3 490 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 TMEM260Q9NX78 707 aa26.83■■□□□ 1.89
LSM4-204ENST00000594828 LGR5O75473 907 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 IGFBP4P22692 258 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 CLK2P49760 499 aaKnown RBP26.82■■□□□ 1.88
LSM4-204ENST00000594828 ARHGAP4P98171 946 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 ADGRE1Q14246 886 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 TCTN1Q2MV58 587 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 CEP55Q53EZ4 464 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 ERAP1Q9NZ08 941 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 NRCAMQ92823 1304 aa26.82■■□□□ 1.88
LSM4-204ENST00000594828 PRPF3O43395 683 aaKnown RBP26.81■■□□□ 1.88
LSM4-204ENST00000594828 EFCAB14O75071 495 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 CAND2O75155 1236 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 ADAM17P78536 824 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 LMBR1Q8WVP7 490 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 GLG1Q92896 1179 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 ZBED2Q9BTP6 218 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 SMARCAD1Q9H4L7 1026 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 JPH1Q9HDC5 661 aaPredicted RBP26.81■■□□□ 1.88
LSM4-204ENST00000594828 NID2Q14112 1375 aa26.81■■□□□ 1.88
LSM4-204ENST00000594828 TLL1O43897 1013 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 ARP10275 920 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 ZNF76P36508 570 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 SREBF1P36956 1147 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 DEFB103AP81534 67 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 AKAP17AQ02040 695 aaKnown RBP26.8■■□□□ 1.88
LSM4-204ENST00000594828 JAKMIP3Q5VZ66 844 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 RUFY3Q7L099 469 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 USP38Q8NB14 1042 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 CCDC12Q8WUD4 166 aaPredicted RBP26.8■■□□□ 1.88
LSM4-204ENST00000594828 PPM1EQ8WY54 764 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 SDF4Q9BRK5 362 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 SLC9A2Q9UBY0 812 aa26.8■■□□□ 1.88
LSM4-204ENST00000594828 MARK3P27448 753 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 PKN1Q16512 942 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 DBF4BQ8NFT6 615 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 PHKBQ93100 1093 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 ZMYND12Q9H0C1 365 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 ZSWIM6Q9HCJ5 1215 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 C6orf50Q9HD87 102 aa26.79■■□□□ 1.88
LSM4-204ENST00000594828 ESYT2A0FGR8 921 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 MEIS1O00470 390 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 CTSHP09668 335 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 PDIA3P30101 505 aaKnown RBP26.78■■□□□ 1.88
LSM4-204ENST00000594828 EVCP57679 992 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 PPFIA1Q13136 1202 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 TMCO2Q7Z6W1 182 aaPredicted RBP26.78■■□□□ 1.88
LSM4-204ENST00000594828 CERS4Q9HA82 394 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 AGO4Q9HCK5 861 aaKnown RBP26.78■■□□□ 1.88
LSM4-204ENST00000594828 PPP4R2Q9NY27 417 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 NFASCO94856 1347 aa26.78■■□□□ 1.88
LSM4-204ENST00000594828 RBAK-RBAKDNI3L0D1 243 aa26.77■■□□□ 1.88
LSM4-204ENST00000594828 CCT2P78371 535 aaKnown RBP26.77■■□□□ 1.88
LSM4-204ENST00000594828 TAP1Q03518 808 aa26.77■■□□□ 1.88
LSM4-204ENST00000594828 NTRK3Q16288 839 aa26.77■■□□□ 1.88
LSM4-204ENST00000594828 PLEKHG4Q58EX7 1191 aa26.77■■□□□ 1.88
LSM4-204ENST00000594828 MCTP2Q6DN12 878 aa26.77■■□□□ 1.88
LSM4-204ENST00000594828 CYP46A1Q9Y6A2 500 aa26.77■■□□□ 1.88
LSM4-204ENST00000594828 EYSQ5T1H1 3165 aa26.76■■□□□ 1.87
LSM4-204ENST00000594828 GNA11P29992 359 aa26.76■■□□□ 1.87
LSM4-204ENST00000594828 GRIK4Q16099 956 aa26.76■■□□□ 1.87
LSM4-204ENST00000594828 RNF26Q9BY78 433 aaPredicted RBP26.76■■□□□ 1.87
LSM4-204ENST00000594828 AZI2Q9H6S1 392 aa26.76■■□□□ 1.87
LSM4-204ENST00000594828 CHD9Q3L8U1 2897 aa26.76■■□□□ 1.87
LSM4-204ENST00000594828 PPFIA3O75145 1194 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 ARHGEF15O94989 841 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 GJB5O95377 273 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 IFNAR1P17181 557 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 ACTR2P61160 394 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 ITGB3BPQ13352 177 aaPredicted RBP26.75■■□□□ 1.87
LSM4-204ENST00000594828 TOB2Q14106 344 aaPredicted RBP26.75■■□□□ 1.87
LSM4-204ENST00000594828 CCDC85BQ15834 202 aaPredicted RBP26.75■■□□□ 1.87
LSM4-204ENST00000594828 TAF2Q6P1X5 1199 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 NIPA1Q7RTP0 329 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 REXO1Q8N1G1 1221 aaKnown RBP26.75■■□□□ 1.87
LSM4-204ENST00000594828 SEPT8Q92599 483 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 PCYT2Q99447 389 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 RAD9AQ99638 391 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 SLC26A6Q9BXS9 759 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 NCOA5Q9HCD5 579 aaKnown RBP26.75■■□□□ 1.87
LSM4-204ENST00000594828 MYO9BQ13459 2157 aa26.75■■□□□ 1.87
LSM4-204ENST00000594828 RFXAPO00287 272 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 CYP3A4P08684 503 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 FAM26DQ5JW98 314 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.74■■□□□ 1.87
LSM4-204ENST00000594828 RPAINQ86UA6 219 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 PLA2G4DQ86XP0 818 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 ARNTL2Q8WYA1 636 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 TNPO1Q92973 898 aaKnown RBP26.74■■□□□ 1.87
LSM4-204ENST00000594828 COL25A1Q9BXS0 654 aaPredicted RBP26.74■■□□□ 1.87
LSM4-204ENST00000594828 TM6SF1Q9BZW5 370 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 TUBE1Q9UJT0 475 aa26.74■■□□□ 1.87
LSM4-204ENST00000594828 PTPRSQ13332 1948 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms