RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 C7orf61Q8IZ16 206 aa22.2■■□□□ 1.14
LSM4-203ENST00000593829 SLC9A2Q9UBY0 812 aa22.2■■□□□ 1.14
LSM4-203ENST00000593829 SLC43A3Q8NBI5 491 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 NAP1L4Q99733 375 aaKnown RBP22.19■■□□□ 1.14
LSM4-203ENST00000593829 FOXP1Q9H334 677 aaPredicted RBP22.19■■□□□ 1.14
LSM4-203ENST00000593829 GRIN2DO15399 1336 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 FAM205CA6NFA0 338 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 TDP2O95551 362 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 CDK7P50613 346 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 MBOAT7Q96N66 472 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 TBC1D22BQ9NU19 505 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 MROH7Q68CQ1 1323 aa22.19■■□□□ 1.14
LSM4-203ENST00000593829 ALPK3Q96L96 1907 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 PQBP1O60828 265 aaKnown RBP22.18■■□□□ 1.14
LSM4-203ENST00000593829 ZNF286BP0CG31 522 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 TLE2Q04725 743 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 GNL2Q13823 731 aaKnown RBP22.18■■□□□ 1.14
LSM4-203ENST00000593829 PPP4R3AQ6IN85 833 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 ANKRD33Q7Z3H0 272 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 SEPT1Q8WYJ6 367 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 KAT2BQ92831 832 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 INTS4Q96HW7 963 aaKnown RBP22.18■■□□□ 1.14
LSM4-203ENST00000593829 TOX2Q96NM4 488 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 KATNAL1Q9BW62 490 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 TELO2Q9Y4R8 837 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 DOCK5Q9H7D0 1870 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 CCNT1O60563 726 aaKnown RBP22.18■■□□□ 1.14
LSM4-203ENST00000593829 OFD1O75665 1012 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 F2P00734 622 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 GCFC2P16383 781 aaKnown RBP22.18■■□□□ 1.14
LSM4-203ENST00000593829 NBPF20Q3BBV1 942 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 UIMC1Q96RL1 719 aa22.18■■□□□ 1.14
LSM4-203ENST00000593829 DDX25Q9UHL0 483 aaKnown RBP22.18■■□□□ 1.14
LSM4-203ENST00000593829 DCDC2CA8MYV0 355 aa22.17■■□□□ 1.14
LSM4-203ENST00000593829 MSH4O15457 936 aa22.17■■□□□ 1.14
LSM4-203ENST00000593829 DHX15O43143 795 aaKnown RBP22.17■■□□□ 1.14
LSM4-203ENST00000593829 LGALS2P05162 132 aa22.17■■□□□ 1.14
LSM4-203ENST00000593829 PDLIM2Q96JY6 352 aa22.17■■□□□ 1.14
LSM4-203ENST00000593829 C16orf70Q9BSU1 422 aa22.17■■□□□ 1.14
LSM4-203ENST00000593829 GSTTP1A0A1W2PQM5 241 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 TCF7P36402 384 aaPredicted RBP22.16■■□□□ 1.14
LSM4-203ENST00000593829 CHMP4BP1P59074 171 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 LARP1BQ659C4 914 aaKnown RBP22.16■■□□□ 1.14
LSM4-203ENST00000593829 NFRKBQ6P4R8 1299 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 H3BQV1 296 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 DDX39AO00148 427 aaKnown RBP22.16■■□□□ 1.14
LSM4-203ENST00000593829 PSEN2P49810 448 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 ZSCAN23Q3MJ62 389 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 NOSTRINQ8IVI9 506 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 SLC5A5Q92911 643 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 TCEAL9Q9UHQ7 104 aa22.16■■□□□ 1.14
LSM4-203ENST00000593829 SCN10AQ9Y5Y9 1956 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 H3BRB1 525 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 ACTR2P61160 394 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 MFSD10Q14728 455 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 KIAA0753Q2KHM9 967 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 UTP14CQ5TAP6 766 aaKnown RBP22.15■■□□□ 1.14
LSM4-203ENST00000593829 MCTP1Q6DN14 999 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 RIT2Q99578 217 aa22.15■■□□□ 1.14
LSM4-203ENST00000593829 TUT1Q9H6E5 874 aaKnown RBP22.15■■□□□ 1.14
LSM4-203ENST00000593829 HAS3O00219 553 aa22.14■■□□□ 1.14
LSM4-203ENST00000593829 TLR3O15455 904 aaKnown RBP22.14■■□□□ 1.14
LSM4-203ENST00000593829 SLC37A4O43826 429 aa22.14■■□□□ 1.14
LSM4-203ENST00000593829 U2AF2P26368 475 aaKnown RBP eCLIP22.14■■□□□ 1.14
LSM4-203ENST00000593829 PTPN11Q06124 597 aaPredicted RBP22.14■■□□□ 1.14
LSM4-203ENST00000593829 FAM47CQ5HY64 1035 aa22.14■■□□□ 1.14
LSM4-203ENST00000593829 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.14■■□□□ 1.14
LSM4-203ENST00000593829 FAM126BQ8IXS8 530 aa22.14■■□□□ 1.14
LSM4-203ENST00000593829 ZNF215Q9UL58 517 aaPredicted RBP22.14■■□□□ 1.14
LSM4-203ENST00000593829 CCNE2O96020 404 aa22.14■■□□□ 1.13
LSM4-203ENST00000593829 CLTBP09497 229 aa22.14■■□□□ 1.13
LSM4-203ENST00000593829 KRT76Q01546 638 aa22.14■■□□□ 1.13
LSM4-203ENST00000593829 ETNPPLQ8TBG4 499 aa22.14■■□□□ 1.13
LSM4-203ENST00000593829 PRKAG2Q9UGJ0 569 aa22.14■■□□□ 1.13
LSM4-203ENST00000593829 PDE4DIPQ5VU43 2346 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 KIF28PB7ZC32 967 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 GAS7O60861 476 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 PDCP20941 246 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 FAAP100Q0VG06 881 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 LRCH2Q5VUJ6 765 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 ZNF746Q6NUN9 644 aaPredicted RBP22.13■■□□□ 1.13
LSM4-203ENST00000593829 TRIM50Q86XT4 487 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 C7orf31Q8N865 590 aa22.13■■□□□ 1.13
LSM4-203ENST00000593829 H0YGN5 161 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 ATG7O95352 703 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 SESTD1Q86VW0 696 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 PPP1R13LQ8WUF5 828 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 GLG1Q92896 1179 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 TEKT3Q9BXF9 490 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 SMARCAD1Q9H4L7 1026 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 AZI2Q9H6S1 392 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 PRDM5Q9NQX1 630 aaPredicted RBP22.12■■□□□ 1.13
LSM4-203ENST00000593829 PDLIM7Q9NR12 457 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 ZMYND8Q9ULU4 1186 aaPredicted RBP22.12■■□□□ 1.13
LSM4-203ENST00000593829 EMSYQ7Z589 1322 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 PSMD10O75832 226 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 CD4P01730 458 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 ATP2B1P20020 1258 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 MSNP26038 577 aaKnown RBP22.12■■□□□ 1.13
LSM4-203ENST00000593829 SMAP1Q8IYB5 467 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms