RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 MUTP22033 750 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 KRT76Q01546 638 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 GSE1Q14687 1217 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 EPHA7Q15375 998 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 NT5DC1Q5TFE4 455 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 MAMDC4Q6UXC1 1216 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 CATSPER3Q86XQ3 398 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 GRAMD1CQ8IYS0 662 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 KCTD17Q8N5Z5 321 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 SPATA20Q8TB22 786 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 PLIN2Q99541 437 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 MTRQ99707 1265 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 SENP7Q9BQF6 1050 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 TUFT1Q9NNX1 390 aa12.93□□□□□ -0.34
CACNA1A-213ENST00000593267 MKI67P46013 3256 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 CHMP2AO43633 222 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 FKTNO75072 461 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 MYL1P05976 194 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 HOXC6P09630 235 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 CCDC192P0DO97 292 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 TGFB3P10600 412 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 SFNP31947 248 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 SARSP49591 514 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 JAK3P52333 1124 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 TYRO3Q06418 890 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 DPYDQ12882 1025 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 ZRSR1Q15695 479 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 FBXO46Q6PJ61 603 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 MIER3Q7Z3K6 550 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 KCNK18Q7Z418 384 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 GAS2L3Q86XJ1 694 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 RAD54LQ92698 747 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 USP6NLQ92738 828 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 MAML3Q96JK9 1138 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 HSD17B14Q9BPX1 270 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 TSPY26PQ9H489 355 aa12.92□□□□□ -0.34
CACNA1A-213ENST00000593267 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 CCNE2O96020 404 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 UBA1P22314 1058 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 AFMP43652 599 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SP2Q02086 613 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SASS6Q6UVJ0 657 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SEPT14Q6ZU15 432 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SMAP1Q8IYB5 467 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SOCS4Q8WXH5 440 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 DYDC2Q96IM9 177 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 VTA1Q9NP79 307 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SLC5A4Q9NY91 659 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 SLC9A2Q9UBY0 812 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 KIAA1024Q9UPX6 916 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 PCDHA5Q9Y5H7 936 aa12.91□□□□□ -0.34
CACNA1A-213ENST00000593267 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 SLITRK3O94933 977 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 CTGFP29279 349 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 CYP4A11Q02928 519 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 MCM6Q14566 821 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 STX1AQ16623 288 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 SV2BQ7L1I2 683 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 GIMAP8Q8ND71 665 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 STAMQ92783 540 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 SMARCE1Q969G3 411 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 KATNBL1Q9H079 304 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 JPH1Q9HDC5 661 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 RGL1Q9NZL6 768 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 HTTP42858 3142 aa12.9□□□□□ -0.34
CACNA1A-213ENST00000593267 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 E9PMD0 336 aa12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 SMC2O95347 1197 aa12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 LYPLA2O95372 231 aa12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 ARIH2O95376 493 aa12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 SNAI1O95863 264 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-213ENST00000593267 IGHA2P01877 340 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms