RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NKX3-2P78367 333 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 PTGDRQ13258 359 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CALCRLQ16602 461 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 Q4G0T1 1027 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 C1orf53Q5VUE5 145 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 PPP4R3AQ6IN85 833 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 SLC5A5Q92911 643 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CLIC6Q96NY7 704 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 GDF15Q99988 308 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 LBHD1Q9BQE6 289 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-220ENST00000593008 UBE2OQ9C0C9 1292 aaKnown RBP10.91□□□□□ -0.66
DDX39A-220ENST00000593008 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 ELP1O95163 1332 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 LAMA3Q16787 3333 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 POTEMA6NI47 508 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 DCDC2CA8MYV0 355 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 ARVCFO00192 962 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 EML1O00423 815 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 DHX15O43143 795 aaKnown RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 BAG4O95429 457 aaKnown RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 OR52Z1P0C646 297 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 ITGB8P26012 769 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 TRAPPC10P48553 1259 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 NASPP49321 788 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 CPT1AP50416 773 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 ATP2C1P98194 919 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 FAAP100Q0VG06 881 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 ITGA7Q13683 1181 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 SPECC1Q5M775 1068 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 MCTP2Q6DN12 878 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 TEX2Q8IWB9 1127 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 AFG1LQ8WV93 481 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 LEO1Q8WVC0 666 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 BADQ92934 168 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 ZNF577Q9BSK1 485 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 UNC45AQ9H3U1 944 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 TMEM39AQ9NV64 488 aa10.9□□□□□ -0.66
DDX39A-220ENST00000593008 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 FBXO2Q9UK22 296 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-220ENST00000593008 GRIN2DO15399 1336 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 VWA3AA6NCI4 1184 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 NKRFO15226 690 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDX39A-220ENST00000593008 GGPS1O95749 300 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 GH1P01241 217 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 CDC25AP30304 524 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 ICAM3P32942 547 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 TXKP42681 527 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 CDK7P50613 346 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDX39A-220ENST00000593008 ARHGAP1Q07960 439 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 SPIRE1Q08AE8 756 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 STK38Q15208 465 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 BRDTQ58F21 947 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-220ENST00000593008 XRRA1Q6P2D8 792 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 ANKRD33Q7Z3H0 272 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 LINC00301Q8NCQ3 95 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
DDX39A-220ENST00000593008 TCHHQ07283 1943 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 A0A087WWV3 80 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 IPO5O00410 1097 aaKnown RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 GADD45BO75293 160 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 PSMD10O75832 226 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 CABYRO75952 493 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 RAG1P15918 1043 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 GCFC2P16383 781 aaKnown RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 PURAQ00577 322 aaKnown RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 SETQ01105 290 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 SLC39A14Q15043 492 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 UGCGQ16739 394 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 GNPTABQ3T906 1256 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 LRCH2Q5VUJ6 765 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 NCAPH2Q6IBW4 605 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 FAM126BQ8IXS8 530 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 LRRC15Q8TF66 581 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 ZNF396Q96N95 335 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 TOX2Q96NM4 488 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 MTG1Q9BT17 334 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-220ENST00000593008 TRPV6Q9H1D0 765 aa10.88□□□□□ -0.67
DDX39A-220ENST00000593008 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 TMEM150BA6NC51 233 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 A6NJR5 290 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 KIAA0355O15063 1070 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 SPTLC2O15270 562 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 B4GALT4O60513 344 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 GAS7O60861 476 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 MMP3P08254 477 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 ZNF286BP0CG31 522 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 BMP8BP34820 402 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 TECP42680 631 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 KRT85P78386 507 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms