RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 GOLGA8BA8MQT2 603 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 MAFGO15525 162 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 GTPBP6O43824 516 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-240ENST00000592815 GJB5O95377 273 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 HMGB1P09429 215 aaKnown RBP18.42■□□□□ 0.54
CIRBP-240ENST00000592815 CTSHP09668 335 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 FGD1P98174 961 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 TYW1BQ6NUM6 668 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.42■□□□□ 0.542e-8■□□□□ 8.6
CIRBP-240ENST00000592815 SPRED2Q7Z698 418 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 ASB2Q96Q27 587 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 TSPYL2Q9H2G4 693 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-240ENST00000592815 RIC8AQ9NPQ8 531 aa18.42■□□□□ 0.54
CIRBP-240ENST00000592815 CPA1P15085 419 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 POU3F3P20264 500 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-240ENST00000592815 CDC27P30260 824 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 ADAM17P78536 824 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 MRPS5P82675 430 aaKnown RBP18.41■□□□□ 0.54
CIRBP-240ENST00000592815 PLEKHG4Q58EX7 1191 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 KRT40Q6A162 431 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 LMBR1Q8WVP7 490 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 GLG1Q92896 1179 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 CCDC136Q96JN2 1154 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 OSBPL7Q9BZF2 842 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-240ENST00000592815 NRCAMQ92823 1304 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 TTC28Q96AY4 2481 aa18.41■□□□□ 0.54
CIRBP-240ENST00000592815 SMCO2A6NFE2 343 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 CAND2O75155 1236 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 AMHP03971 560 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 ADCY7P51828 1080 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 SKIV2LQ15477 1246 aaKnown RBP18.4■□□□□ 0.54
CIRBP-240ENST00000592815 PPP1R18Q6NYC8 613 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 CYP2W1Q8TAV3 490 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 SEPT8Q92599 483 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 PGBD1Q96JS3 809 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 MXRA8Q9BRK3 442 aa18.4■□□□□ 0.54
CIRBP-240ENST00000592815 STXBP3O00186 592 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 FOSP01100 380 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-240ENST00000592815 MARK3P27448 753 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 ADD1P35611 737 aaKnown RBP18.39■□□□□ 0.53
CIRBP-240ENST00000592815 PPFIA1Q13136 1202 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 GRB10Q13322 594 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 Q6ZUG5 572 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 MYOCDQ8IZQ8 938 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 KCNB2Q92953 911 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
CIRBP-240ENST00000592815 SMARCAD1Q9H4L7 1026 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 KCNH7Q9NS40 1196 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 TMEM260Q9NX78 707 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 BARHL2Q9NY43 387 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 ERAP1Q9NZ08 941 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 MTUS1Q9ULD2 1270 aa18.39■□□□□ 0.53
CIRBP-240ENST00000592815 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
CIRBP-240ENST00000592815 FAM26DQ5JW98 314 aa18.38■□□□□ 0.53
CIRBP-240ENST00000592815 RUFY4Q6ZNE9 571 aa18.38■□□□□ 0.53
CIRBP-240ENST00000592815 TEX2Q8IWB9 1127 aa18.38■□□□□ 0.53
CIRBP-240ENST00000592815 TGS1Q96RS0 853 aaKnown RBP18.38■□□□□ 0.53
CIRBP-240ENST00000592815 JPH1Q9HDC5 661 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-240ENST00000592815 INSL6Q9Y581 213 aa18.38■□□□□ 0.53
CIRBP-240ENST00000592815 SNX14Q9Y5W7 946 aa18.38■□□□□ 0.53
CIRBP-240ENST00000592815 PRRC2BQ5JSZ5 2229 aaKnown RBP18.37■□□□□ 0.53
CIRBP-240ENST00000592815 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 LINC01553A4QN01 128 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 hCG_1984214I3L0E3 225 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 LPXNO60711 386 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 CHRNA1P02708 482 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 ARP10275 920 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 HSPA4P34932 840 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 METAP2P50579 478 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIRBP-240ENST00000592815 RCAN1P53805 252 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 ERVK-21P61565 698 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-240ENST00000592815 GRIK4Q16099 956 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 CEP55Q53EZ4 464 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 TAF2Q6P1X5 1199 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 ZNF713Q8N859 430 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-240ENST00000592815 BRF1Q92994 677 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 SDF4Q9BRK5 362 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 ANO3Q9BYT9 981 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 GLT8D2Q9H1C3 349 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 SLC9A2Q9UBY0 812 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 DOCK5Q9H7D0 1870 aa18.37■□□□□ 0.53
CIRBP-240ENST00000592815 TRANK1O15050 2925 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 ZNF76P36508 570 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 IGBP1P78318 339 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 BLOC1S2Q6QNY1 142 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 PCYT2Q99447 389 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 AZI2Q9H6S1 392 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
CIRBP-240ENST00000592815 AGO4Q9HCK5 861 aaKnown RBP18.36■□□□□ 0.53
CIRBP-240ENST00000592815 SPTBN5Q9NRC6 3674 aaKnown RBP18.36■□□□□ 0.53
CIRBP-240ENST00000592815 MEIS1O00470 390 aa18.35■□□□□ 0.53
CIRBP-240ENST00000592815 UPP2O95045 317 aa18.35■□□□□ 0.53
CIRBP-240ENST00000592815 INSRRP14616 1297 aa18.35■□□□□ 0.53
CIRBP-240ENST00000592815 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
CIRBP-240ENST00000592815 ACTR2P61160 394 aa18.35■□□□□ 0.53
CIRBP-240ENST00000592815 TFF2Q03403 129 aa18.35■□□□□ 0.53
CIRBP-240ENST00000592815 AP3B2Q13367 1082 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms