RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 Q4G0T1 1027 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
H3F3B-212ENST00000592643 NFRKBQ6P4R8 1299 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 SESTD1Q86VW0 696 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 DHX38Q92620 1227 aaKnown RBP13.47□□□□□ -0.25
H3F3B-212ENST00000592643 SLC5A5Q92911 643 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 WNT8BQ93098 351 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 RNPEPQ9H4A4 650 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
H3F3B-212ENST00000592643 SLC9A2Q9UBY0 812 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
H3F3B-212ENST00000592643 LGR5O75473 907 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 CYP2C9P11712 490 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 ZNF76P36508 570 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 EPHB4P54760 987 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 HMGN5P82970 282 aaKnown RBP13.46□□□□□ -0.25
H3F3B-212ENST00000592643 BRDTQ58F21 947 aaPredicted RBP13.46□□□□□ -0.25
H3F3B-212ENST00000592643 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
H3F3B-212ENST00000592643 SEPT1Q8WYJ6 367 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 HAS1Q92839 578 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 KCNMB3Q9NPA1 279 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 HDAC6Q9UBN7 1215 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
H3F3B-212ENST00000592643 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
H3F3B-212ENST00000592643 TRIOBPQ9H2D6 2365 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 H3BRB1 525 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 PSMD10O75832 226 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 XBP1P17861 261 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 ATP4AP20648 1035 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 GJB2P29033 226 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 CHMP4BP1P59074 171 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 ADAM17P78536 824 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 UTP14CQ5TAP6 766 aaKnown RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 BADQ92934 168 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 ZNF577Q9BSK1 485 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 WNT8AQ9H1J5 351 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 TUT1Q9H6E5 874 aaKnown RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 PRDM5Q9NQX1 630 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-212ENST00000592643 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 LTBP2Q14767 1821 aa13.45□□□□□ -0.26
H3F3B-212ENST00000592643 EMSYQ7Z589 1322 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 SMIM10L2AP0DMW4 78 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 SMIM10L2BP0DMW5 78 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 PTPN11Q06124 597 aaPredicted RBP13.44□□□□□ -0.26
H3F3B-212ENST00000592643 GPNMBQ14956 572 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 TRIM71Q2Q1W2 868 aaKnown RBP13.44□□□□□ -0.26
H3F3B-212ENST00000592643 TRAF7Q6Q0C0 670 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 C16orf59Q7L2K0 433 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 CCDC60Q8IWA6 550 aaPredicted RBP13.44□□□□□ -0.26
H3F3B-212ENST00000592643 ZBTB10Q96DT7 871 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 DDX25Q9UHL0 483 aaKnown RBP13.44□□□□□ -0.26
H3F3B-212ENST00000592643 VAV3Q9UKW4 847 aa13.44□□□□□ -0.26
H3F3B-212ENST00000592643 MROH7Q68CQ1 1323 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 TIMP1P01033 207 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 SUPT20HL2P0C7V6 817 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.26
H3F3B-212ENST00000592643 CYP2C18P33260 490 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 TOB1P50616 345 aaPredicted RBP13.43□□□□□ -0.26
H3F3B-212ENST00000592643 SPIRE1Q08AE8 756 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 MARCH8Q5T0T0 291 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 SNX21Q969T3 373 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 RIT2Q99578 217 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
H3F3B-212ENST00000592643 TBC1D22BQ9NU19 505 aa13.43□□□□□ -0.26
H3F3B-212ENST00000592643 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 EML1O00423 815 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 ZNF862O60290 1169 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
H3F3B-212ENST00000592643 MARK3P27448 753 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 BMP8BP34820 402 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 TRIM29Q14134 588 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 NBR1Q14596 966 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 PTGISQ16647 500 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 UGCGQ16739 394 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 ZNF746Q6NUN9 644 aaPredicted RBP13.42□□□□□ -0.26
H3F3B-212ENST00000592643 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 C7orf31Q8N865 590 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 AFAP1L1Q8TED9 768 aa13.42□□□□□ -0.26
H3F3B-212ENST00000592643 MTMR9Q96QG7 549 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms