RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TTLL4Q14679 1199 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 PPP2R5DQ14738 602 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 DISC1Q9NRI5 854 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 ABCB11O95342 1321 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 SNAP23O00161 211 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 HGSO14964 777 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 RFC1P35251 1148 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 ARHGAP4P98171 946 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 STYK1Q6J9G0 422 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 PRPF38AQ8NAV1 312 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 FAM81BQ96LP2 452 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 GOLGA8QA0A0J9YX86 632 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 GOLGA8OA6NCC3 632 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 GOLGA8NF8WBI6 632 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 ZBTB5O15062 677 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 ABCB4P21439 1286 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 UBE2SQ16763 222 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 ADCK5Q3MIX3 580 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 STAG1Q8WVM7 1258 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 GDAP1L1Q96MZ0 367 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 STK38LQ9Y2H1 464 aa14.44□□□□□ -0.1
SMARCA4-216ENST00000591545 RNF8O76064 485 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 POLR2FP61218 127 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 TAF1CQ15572 869 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 SNCBQ16143 134 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 CATSPER4Q7RTX7 472 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 TRIM11Q96F44 468 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 MMP19Q99542 508 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 NBPF26B4DH59 902 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 SF3B3Q15393 1217 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 NBPF10Q6P3W6 841 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 CCDC170Q8IYT3 715 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 NBPF15Q8N660 670 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 PIK3C2BO00750 1634 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 MYO1EQ12965 1108 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 GCNAQ96QF7 691 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 AFG3L2Q9Y4W6 797 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 HSPA6P17066 643 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 MFAP3P55082 362 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 EZH2Q15910 746 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 EFCAB13Q8IY85 973 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 LINC00116Q8NCU8 138 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 PDE11AQ9HCR9 933 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 ARHGEF40Q8TER5 1519 aa14.43□□□□□ -0.1
SMARCA4-216ENST00000591545 MARK3P27448 753 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 ZNF157P51786 506 aaPredicted RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 TRIM42Q8IWZ5 723 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 CCDC197Q8NCU1 140 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 HAUS8Q9BT25 410 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 ACAD9Q9H845 621 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 PYCARDQ9ULZ3 195 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 SETD1BQ9UPS6 1966 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 FAM196BA6NMK8 535 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 IFNB1P01574 187 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 CYP2D6P10635 497 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 PSMC2P35998 433 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 IL9RQ01113 521 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 BBS5Q8N3I7 341 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 LRRC8CQ8TDW0 803 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 CNTNAP4Q9C0A0 1308 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 BUB1O43683 1085 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 MMP1P03956 469 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 ATP1A2P50993 1020 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 TFAMQ00059 246 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 ALCAMQ13740 583 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 CLIC6Q96NY7 704 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 MYCBPQ99417 103 aaPredicted RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 ZC3H13Q5T200 1668 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 CCDC151A5D8V7 595 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 STAT3P40763 770 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 GARSP41250 739 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 MYL7Q01449 175 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 DPH5Q9H2P9 285 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 IFT122Q9HBG6 1241 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 SH3GLB2Q9NR46 395 aa14.42□□□□□ -0.1
SMARCA4-216ENST00000591545 ARHGAP42A6NI28 874 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 ZNF233A6NK53 670 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 ASB14A6NK59 587 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 NSFP46459 744 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 ARPP19P56211 112 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 SNAP25P60880 206 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms