RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 JAK2O60674 1132 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 IL2RAP01589 272 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 PGK2P07205 417 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 FCER1AP12319 257 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 CALML3P27482 149 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 EHHADHQ08426 723 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 SSRP1Q08945 709 aaKnown RBP7.36□□□□□ -1.23
VPS4B-205ENST00000591383 NR5A1Q13285 461 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 TKFCQ3LXA3 575 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 WWC2Q6AWC2 1192 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 ANKRD35Q8N283 1001 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 CHST13Q8NET6 341 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 RAET1EQ8TD07 263 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 DDX11Q96FC9 970 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 MYO19Q96H55 970 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 FAM129BQ96TA1 746 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 AMNQ9BXJ7 453 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 ALDH8A1Q9H2A2 487 aaPredicted RBP7.36□□□□□ -1.23
VPS4B-205ENST00000591383 RIOX1Q9H6W3 641 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 A1CFQ9NQ94 594 aaKnown RBP7.36□□□□□ -1.23
VPS4B-205ENST00000591383 SH2B1Q9NRF2 756 aaPredicted RBP7.36□□□□□ -1.23
VPS4B-205ENST00000591383 PNMA2Q9UL42 364 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 GABRQQ9UN88 632 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 MRPL11Q9Y3B7 192 aaKnown RBP7.36□□□□□ -1.23
VPS4B-205ENST00000591383 PCDHA1Q9Y5I3 950 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 PTCH2Q9Y6C5 1203 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 STK36Q9NRP7 1315 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 SLC15A5A6NIM6 579 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 STXBP3O00186 592 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 CDK2AP1O14519 115 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 CFBP00751 764 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 NR3C2P08235 984 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 SCG2P13521 617 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 ELNP15502 786 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 IFNAR1P17181 557 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 CYP2B6P20813 491 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 HOXD10P28358 340 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 RGS2P41220 211 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 MAPK8P45983 427 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 FLT3LGP49771 235 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 EVCP57679 992 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 ST3GAL1Q11201 340 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 TRAF1Q13077 416 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 GRB14Q14449 540 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 PPP2R5BQ15173 497 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 FAM26DQ5JW98 314 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 PPP1R18Q6NYC8 613 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 DPP9Q86TI2 863 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 SREK1Q8WXA9 508 aaKnown RBP7.35□□□□□ -1.23
VPS4B-205ENST00000591383 MTMR8Q96EF0 704 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 ZSCAN31Q96LW9 406 aaPredicted RBP7.35□□□□□ -1.23
VPS4B-205ENST00000591383 DRC1Q96MC2 740 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 AIFM3Q96NN9 605 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 RNF26Q9BY78 433 aaPredicted RBP7.35□□□□□ -1.23
VPS4B-205ENST00000591383 PRDM10Q9NQV6 1147 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 ORC3Q9UBD5 711 aaPredicted RBP7.35□□□□□ -1.23
VPS4B-205ENST00000591383 SRRDQ9UH36 339 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 HRH3Q9Y5N1 445 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 V9GY48 417 aaPredicted RBP7.35□□□□□ -1.23
VPS4B-205ENST00000591383 FRMPD3Q5JV73 1810 aa7.35□□□□□ -1.23
VPS4B-205ENST00000591383 SCAMP3O14828 347 aaKnown RBP7.34□□□□□ -1.23
VPS4B-205ENST00000591383 GPR182O15218 404 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
VPS4B-205ENST00000591383 DEXIO95424 95 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 SMARCA1P28370 1054 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 HOXA13P31271 388 aaPredicted RBP7.34□□□□□ -1.23
VPS4B-205ENST00000591383 MCM2P49736 904 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 ADCY7P51828 1080 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 UBE2SQ16763 222 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 PFKFB3Q16875 520 aaPredicted RBP7.34□□□□□ -1.23
VPS4B-205ENST00000591383 SLC9C1Q4G0N8 1177 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 NAALADL2Q58DX5 795 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 RNF207Q6ZRF8 634 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 ATCAYQ86WG3 371 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 NSUN7Q8NE18 718 aaKnown RBP7.34□□□□□ -1.23
VPS4B-205ENST00000591383 CCDC148Q8NFR7 591 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 CLEC4DQ8WXI8 215 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 CUL5Q93034 780 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 TMX3Q96JJ7 454 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 DUSP9Q99956 384 aaKnown RBP7.34□□□□□ -1.23
VPS4B-205ENST00000591383 RNF19AQ9NV58 838 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 SLC5A4Q9NY91 659 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 CYP39A1Q9NYL5 469 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 VPS54Q9P1Q0 977 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 PARP2Q9UGN5 583 aa7.34□□□□□ -1.23
VPS4B-205ENST00000591383 hCG_1984214I3L0E3 225 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 PRPF3O43395 683 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 ADCY3O60266 1144 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 CTDNEP1O95476 244 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 HMGCRP04035 888 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 HSP90AA1P07900 732 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 ERCC5P28715 1186 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 PRMT2P55345 433 aa7.33□□□□□ -1.24
VPS4B-205ENST00000591383 RPS6P62753 249 aaKnown RBP7.33□□□□□ -1.24
VPS4B-205ENST00000591383 CNTN2Q02246 1040 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms