RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 ZNF408Q9H9D4 720 aa9.49□□□□□ -0.89
NPC1-209ENST00000590723 APEX2Q9UBZ4 518 aa9.49□□□□□ -0.89
NPC1-209ENST00000590723 SPATA31A1Q5TZJ5 1347 aa9.49□□□□□ -0.89
NPC1-209ENST00000590723 TTC21BQ7Z4L5 1316 aa9.49□□□□□ -0.89
NPC1-209ENST00000590723 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
NPC1-209ENST00000590723 RGPD3A6NKT7 1758 aaPredicted RBP9.48□□□□□ -0.89
NPC1-209ENST00000590723 RGPD4Q7Z3J3 1758 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 NPHP3-ACAD11A0A0J9YXS1 232 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 NUDT19A8MXV4 375 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 GCP02774 474 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 SDHBP21912 280 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 ETFBP38117 255 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 LINC00310P59036 64 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 CBX2Q14781 532 aaPredicted RBP9.48□□□□□ -0.89
NPC1-209ENST00000590723 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 BICRALQ6AI39 1079 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 PAQR3Q6TCH7 311 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 MCF2L2Q86YR7 1114 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 LRP2BPQ9P2M1 347 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 CNOT6Q9ULM6 557 aaKnown RBP9.48□□□□□ -0.89
NPC1-209ENST00000590723 KTN1Q86UP2 1357 aaKnown RBP9.48□□□□□ -0.89
NPC1-209ENST00000590723 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 OVOS2A0A0J9YW53 1432 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 OVOS2Q6IE36 1432 aa9.48□□□□□ -0.89
NPC1-209ENST00000590723 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 CYBBP04839 570 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 CFPP27918 469 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 ZNF385BQ569K4 471 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 KRT27Q7Z3Y8 459 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 SIAH1Q8IUQ4 282 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 TRIM59Q8IWR1 403 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 ZNF513Q8N8E2 541 aaPredicted RBP9.47□□□□□ -0.89
NPC1-209ENST00000590723 MCMBPQ9BTE3 642 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 EPN3Q9H201 632 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 IGSF5Q9NSI5 407 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 KLHL14Q9P2G3 628 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 MBD1Q9UIS9 605 aaPredicted RBP9.47□□□□□ -0.89
NPC1-209ENST00000590723 USP47Q96K76 1375 aa9.47□□□□□ -0.89
NPC1-209ENST00000590723 ST20-MTHFSA0A0A6YYL1 179 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 AGRPO00253 132 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 NUAK1O60285 661 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 MAPKAPK2P49137 400 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 SV2CQ496J9 727 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 ZC3H14Q6PJT7 736 aaKnown RBP9.46□□□□□ -0.9
NPC1-209ENST00000590723 EEPD1Q7L9B9 569 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 TMC6Q7Z403 805 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 SIGLEC10Q96LC7 697 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 CYP26B1Q9NR63 512 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 IRAK3Q9Y616 596 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 TTC21AQ8NDW8 1320 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 CRB1P82279 1406 aa9.46□□□□□ -0.9
NPC1-209ENST00000590723 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.9
NPC1-209ENST00000590723 N4BP3O15049 544 aa9.45□□□□□ -0.9
NPC1-209ENST00000590723 RPTNQ6XPR3 784 aa9.45□□□□□ -0.9
NPC1-209ENST00000590723 DEFB132Q7Z7B7 95 aa9.45□□□□□ -0.9
NPC1-209ENST00000590723 CILP2Q8IUL8 1156 aa9.45□□□□□ -0.9
NPC1-209ENST00000590723 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
NPC1-209ENST00000590723 GCM1Q9NP62 436 aa9.45□□□□□ -0.9
NPC1-209ENST00000590723 DBR1Q9UK59 544 aaKnown RBP9.45□□□□□ -0.9
NPC1-209ENST00000590723 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
NPC1-209ENST00000590723 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
NPC1-209ENST00000590723 SUSD5O60279 629 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 NPHS1O60500 1241 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 DBHP09172 617 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 GTF2IRD2BQ6EKJ0 949 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 IQCEQ6IPM2 695 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 GTF2IRD2Q86UP8 949 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 NME9Q86XW9 330 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 TMEM151BQ8IW70 566 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 LZTR1Q8N653 840 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 SGPP1Q9BX95 441 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 NKX2-4Q9H2Z4 354 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 USP35Q9P2H5 1018 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 NUDT5Q9UKK9 219 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 DISP2A7MBM2 1401 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 LRP5O75197 1615 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 NHSQ6T4R5 1651 aa9.44□□□□□ -0.9
NPC1-209ENST00000590723 MSL3P1P0C860 447 aa9.43□□□□□ -0.9
NPC1-209ENST00000590723 ZSCAN22P10073 491 aaPredicted RBP9.43□□□□□ -0.9
NPC1-209ENST00000590723 SCRN1Q12765 414 aa9.43□□□□□ -0.9
NPC1-209ENST00000590723 ARHGEF25Q86VW2 580 aa9.43□□□□□ -0.9
NPC1-209ENST00000590723 COPS5Q92905 334 aa9.43□□□□□ -0.9
NPC1-209ENST00000590723 MMP19Q99542 508 aa9.43□□□□□ -0.9
NPC1-209ENST00000590723 CNTD2Q9H8S5 307 aa9.43□□□□□ -0.9
NPC1-209ENST00000590723 BTAF1O14981 1849 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 PFKLP17858 780 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 HOXC12P31275 282 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 PLEKHN1Q494U1 663 aaPredicted RBP9.42□□□□□ -0.9
NPC1-209ENST00000590723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.42□□□□□ -0.9
NPC1-209ENST00000590723 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 MZB1Q8WU39 189 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 MRGPRX3Q96LB0 322 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 KCTD3Q9Y597 815 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
NPC1-209ENST00000590723 NINLQ9Y2I6 1382 aa9.41□□□□□ -0.9
NPC1-209ENST00000590723 WDR17Q8IZU2 1322 aa9.41□□□□□ -0.9
NPC1-209ENST00000590723 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms