RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TNFRSF8P28908 595 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 FOXO4P98177 505 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 LRRC23Q53EV4 343 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-228ENST00000590347 SMIM5Q71RC9 77 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 DDX50Q9BQ39 737 aaKnown RBP16.57■□□□□ 0.24
CIRBP-228ENST00000590347 METTL5Q9NRN9 209 aaKnown RBP16.57■□□□□ 0.24
CIRBP-228ENST00000590347 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 MYH7BA7E2Y1 1941 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 PSMA7O14818 248 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 MAGEA10P43363 369 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-228ENST00000590347 ZNF572Q7Z3I7 529 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-228ENST00000590347 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-228ENST00000590347 LACTBP83111 547 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ATP11AP98196 1134 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ITIH3Q06033 890 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 MIIPQ5JXC2 388 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 RBM41Q96IZ5 413 aaKnown RBP16.56■□□□□ 0.24
CIRBP-228ENST00000590347 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 SNAP23O00161 211 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ETS2P15036 469 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 TNNC1P63316 161 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 STK4Q13043 487 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 PRPF4BQ13523 1007 aaKnown RBP16.56■□□□□ 0.24
CIRBP-228ENST00000590347 WTAPQ15007 396 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 TTI2Q6NXR4 508 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 USP38Q8NB14 1042 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 LRRC45Q96CN5 670 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 SLC4A9Q96Q91 983 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 PAIP2Q9BPZ3 127 aaKnown RBP16.56■□□□□ 0.24
CIRBP-228ENST00000590347 RHBDL2Q9NX52 303 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 CHCHD3Q9NX63 227 aaKnown RBP16.56■□□□□ 0.24
CIRBP-228ENST00000590347 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 HIP1RO75146 1068 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 DEXIO95424 95 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 CASP7P55210 303 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 BIRC3Q13489 604 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 CCNJLQ8IV13 435 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 WASF1Q92558 559 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ISCUQ9H1K1 167 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ARMT1Q9H993 441 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ETNK1Q9HBU6 452 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ADAMTS1Q9UHI8 967 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 USH1CQ9Y6N9 552 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
CIRBP-228ENST00000590347 MYH7P12883 1935 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 TCP11X1B4DZS4 312 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 F8VZ95 297 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 KRT2P35908 639 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 LLGL1Q15334 1064 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 ZC2HC1CQ53FD0 456 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-228ENST00000590347 GALNT15Q8N3T1 639 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 TTC8Q8TAM2 541 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 FAM81AQ8TBF8 368 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 TAF4BQ92750 862 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 RMDN2Q96LZ7 410 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 FAM210AQ96ND0 272 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 EYA2O00167 538 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 PPFIA2O75334 1257 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
CIRBP-228ENST00000590347 RIPK1Q13546 671 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 CUL3Q13618 768 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 STAG2Q8N3U4 1231 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 FITM2Q8N6M3 262 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 CCHCR1Q8TD31 782 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 EPS8L3Q8TE67 593 aaKnown RBP16.55■□□□□ 0.24
CIRBP-228ENST00000590347 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 NAPBQ9H115 298 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 PLAGL2Q9UPG8 496 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 ZBTB1Q9Y2K1 713 aa16.55■□□□□ 0.24
CIRBP-228ENST00000590347 TTC36A6NLP5 189 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 PRLRP16471 622 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 TPP2P29144 1249 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-228ENST00000590347 TMC3Q7Z5M5 1100 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-228ENST00000590347 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
CIRBP-228ENST00000590347 SWAP70Q9UH65 585 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 AFF2P51816 1311 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 MYH1P12882 1939 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 KRIT1O00522 736 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 MCAMP43121 646 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 FOXB2Q5VYV0 432 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 SEPT14Q6ZU15 432 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 ATXN2LQ8WWM7 1075 aaKnown RBP16.54■□□□□ 0.24
CIRBP-228ENST00000590347 SUGT1Q9Y2Z0 365 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 GM2AP17900 193 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 SP100P23497 879 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-228ENST00000590347 PDE4DQ08499 809 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 TNIP1Q15025 636 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
CIRBP-228ENST00000590347 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
CIRBP-228ENST00000590347 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-228ENST00000590347 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-228ENST00000590347 COPS2P61201 443 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms