RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SETD4Q9NVD3 440 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 TREHO43280 583 aa23.51■■□□□ 1.35
CIRBP-226ENST00000590171 PARNO95453 639 aaKnown RBP23.51■■□□□ 1.35
CIRBP-226ENST00000590171 CXCL10P02778 98 aa23.51■■□□□ 1.35
CIRBP-226ENST00000590171 ARP10275 920 aa23.51■■□□□ 1.35
CIRBP-226ENST00000590171 CEP55Q53EZ4 464 aa23.51■■□□□ 1.35
CIRBP-226ENST00000590171 LARP6Q9BRS8 491 aaKnown RBP23.51■■□□□ 1.35
CIRBP-226ENST00000590171 SLC26A6Q9BXS9 759 aa23.51■■□□□ 1.35
CIRBP-226ENST00000590171 CDH23Q9H251 3354 aa23.51■■□□□ 1.35
CIRBP-226ENST00000590171 ARHGAP4P98171 946 aa23.5■■□□□ 1.35
CIRBP-226ENST00000590171 AKAP17AQ02040 695 aaKnown RBP23.5■■□□□ 1.35
CIRBP-226ENST00000590171 MBTPS1Q14703 1052 aa23.5■■□□□ 1.35
CIRBP-226ENST00000590171 SLC17A8Q8NDX2 589 aa23.5■■□□□ 1.35
CIRBP-226ENST00000590171 CCDC12Q8WUD4 166 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-226ENST00000590171 C6orf50Q9HD87 102 aa23.5■■□□□ 1.35
CIRBP-226ENST00000590171 JPH1Q9HDC5 661 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-226ENST00000590171 MEIS1O00470 390 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 BAIAP3O94812 1187 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 MYOGP15173 224 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 FOSL2P15408 326 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 THPOP40225 353 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 ADAM17P78536 824 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 TCTN1Q2MV58 587 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 LMBR1Q8WVP7 490 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 CRYGNQ8WXF5 182 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 SLC9A7Q96T83 725 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 AGO4Q9HCK5 861 aaKnown RBP23.49■■□□□ 1.35
CIRBP-226ENST00000590171 SLC9A2Q9UBY0 812 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 PCDHA11Q9Y5I1 949 aa23.49■■□□□ 1.35
CIRBP-226ENST00000590171 GNAT1P11488 350 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 MARK3P27448 753 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 ITGB3BPQ13352 177 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-226ENST00000590171 CNKSR3Q6P9H4 555 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 REXO1Q8N1G1 1221 aaKnown RBP23.48■■□□□ 1.35
CIRBP-226ENST00000590171 ZNF274Q96GC6 653 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-226ENST00000590171 SLC28A3Q9HAS3 691 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 PDRG1Q9NUG6 133 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 VPS54Q9P1Q0 977 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 TRIP12Q14669 1992 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-226ENST00000590171 NFASCO94856 1347 aa23.48■■□□□ 1.35
CIRBP-226ENST00000590171 FAM86B1E9PN63 330 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 FAM86B2P0C5J1 330 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 GNA11P29992 359 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 ZNF76P36508 570 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 NIPA1Q7RTP0 329 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 PHOSPHO2Q8TCD6 241 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 RASGRP4Q8TDF6 673 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 GLG1Q92896 1179 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 PCYT2Q99447 389 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 SDF4Q9BRK5 362 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 ERAP1Q9NZ08 941 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 EMSYQ7Z589 1322 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 NRCAMQ92823 1304 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 GBF1Q92538 1859 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 TET1Q8NFU7 2136 aa23.47■■□□□ 1.35
CIRBP-226ENST00000590171 IGLV3-22A0A075B6J6 115 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 RSPH10B2B2RC85 870 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 LGR5O75473 907 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 CYP3A4P08684 503 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 RSPH10BP0C881 870 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 WDR5P61964 334 aaKnown RBP23.46■■□□□ 1.35
CIRBP-226ENST00000590171 STK3Q13188 491 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 MCTP2Q6DN12 878 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 HERC6Q8IVU3 1022 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 CCDC148Q8NFR7 591 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 MAFAQ8NHW3 353 aaPredicted RBP23.46■■□□□ 1.35
CIRBP-226ENST00000590171 SMARCAD1Q9H4L7 1026 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 PRDM12Q9H4Q4 367 aa23.46■■□□□ 1.35
CIRBP-226ENST00000590171 CAND2O75155 1236 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 CTSHP09668 335 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 KCNJ6P48051 423 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 ACTR2P61160 394 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 PPFIA1Q13136 1202 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 PPP2R2DQ66LE6 453 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 PLA2G4DQ86XP0 818 aa23.45■■□□□ 1.34
CIRBP-226ENST00000590171 CPLX1O14810 134 aa23.44■■□□□ 1.34
CIRBP-226ENST00000590171 DEFB103AP81534 67 aa23.44■■□□□ 1.34
CIRBP-226ENST00000590171 SSRP1Q08945 709 aaKnown RBP23.44■■□□□ 1.34
CIRBP-226ENST00000590171 TRIM22Q8IYM9 498 aa23.44■■□□□ 1.34
CIRBP-226ENST00000590171 BICD2Q8TD16 824 aa23.44■■□□□ 1.34
CIRBP-226ENST00000590171 ABHD14A-ACY1A0A1B0GW23 586 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 CA3P07451 260 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 ANAPC15P60006 121 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 GRIK4Q16099 956 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 RUFY4Q6ZNE9 571 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 TMCO2Q7Z6W1 182 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-226ENST00000590171 OSBPL7Q9BZF2 842 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 AZI2Q9H6S1 392 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 SH3GLB2Q9NR46 395 aa23.43■■□□□ 1.34
CIRBP-226ENST00000590171 DDX39AO00148 427 aaKnown RBP23.42■■□□□ 1.34
CIRBP-226ENST00000590171 ATG7O95352 703 aa23.42■■□□□ 1.34
CIRBP-226ENST00000590171 CCNE2O96020 404 aa23.42■■□□□ 1.34
CIRBP-226ENST00000590171 IKBKEQ14164 716 aa23.42■■□□□ 1.34
CIRBP-226ENST00000590171 DBF4BQ8NFT6 615 aa23.42■■□□□ 1.34
CIRBP-226ENST00000590171 DHX15O43143 795 aaKnown RBP23.41■■□□□ 1.34
CIRBP-226ENST00000590171 DEXIO95424 95 aa23.41■■□□□ 1.34
CIRBP-226ENST00000590171 NLRP5P59047 1200 aa23.41■■□□□ 1.34
CIRBP-226ENST00000590171 SCRN1Q12765 414 aa23.41■■□□□ 1.34
CIRBP-226ENST00000590171 PLEKHG4Q58EX7 1191 aa23.41■■□□□ 1.34
CIRBP-226ENST00000590171 MARCH8Q5T0T0 291 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms