RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ANKRD18BA2A2Z9 1011 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 DNM1LO00429 736 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-209ENST00000589941 HDLBPQ00341 1268 aaKnown RBP9.7□□□□□ -0.86
SMAD4-209ENST00000589941 PSMD2Q13200 908 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 NKAPLQ5M9Q1 402 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 SLC39A5Q6ZMH5 540 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 TRPV1Q8NER1 839 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 GIPC2Q8TF65 315 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 ANKS1AQ92625 1134 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 ASCC2Q9H1I8 757 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-209ENST00000589941 PORCNQ9H237 461 aa9.7□□□□□ -0.86
SMAD4-209ENST00000589941 MEGF11A6BM72 1044 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 PAGE1O75459 146 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 HIBADHP31937 336 aaKnown RBP9.69□□□□□ -0.86
SMAD4-209ENST00000589941 ANO1Q5XXA6 986 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 CDC42EP5Q6NZY7 148 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 ZBED9Q6R2W3 1325 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 APBA2Q99767 749 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 PICK1Q9NRD5 415 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 MORF4L1Q9UBU8 362 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 DDX20Q9UHI6 824 aaKnown RBP9.69□□□□□ -0.86
SMAD4-209ENST00000589941 PPM1HQ9ULR3 514 aa9.69□□□□□ -0.86
SMAD4-209ENST00000589941 PTPRSQ13332 1948 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 KMT2EQ8IZD2 1858 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 SMIM22K7EJ46 135 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 ENC1O14682 589 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 CTSHP09668 335 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 GCLCP48506 637 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-209ENST00000589941 HMGCS2P54868 508 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 FOXO4P98177 505 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 PPP2R3AQ06190 1150 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 EPHA10Q5JZY3 1008 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 EXOSC6Q5RKV6 272 aaKnown RBP9.68□□□□□ -0.86
SMAD4-209ENST00000589941 CCDC146Q8IYE0 955 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 SOCS4Q8WXH5 440 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 CORO1BQ9BR76 489 aa9.68□□□□□ -0.86
SMAD4-209ENST00000589941 PRKRIP1Q9H875 184 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-209ENST00000589941 CACNA1FO60840 1977 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 ZNFX1Q9P2E3 1918 aaKnown RBP9.67□□□□□ -0.86
SMAD4-209ENST00000589941 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-209ENST00000589941 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-209ENST00000589941 CELA3AP09093 270 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 PREPP48147 710 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 TLE2Q04725 743 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 LMOD3Q0VAK6 560 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 GCKRQ14397 625 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 MEI1Q5TIA1 1274 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 PDZD3Q86UT5 571 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 ARMC10Q8N2F6 343 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 LPAR1Q92633 364 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 FERMT2Q96AC1 680 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 FAM46AQ96IP4 442 aaKnown RBP9.67□□□□□ -0.86
SMAD4-209ENST00000589941 FBXL18Q96ME1 805 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMAD4-209ENST00000589941 YBX2Q9Y2T7 364 aaKnown RBP9.67□□□□□ -0.86
SMAD4-209ENST00000589941 PLXNA3P51805 1871 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 FOCADQ5VW36 1801 aa9.67□□□□□ -0.86
SMAD4-209ENST00000589941 MYO15AQ9UKN7 3530 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 DDX58O95786 925 aaKnown RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 CNGA1P29973 690 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 RGS2P41220 211 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 FPGSQ05932 587 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 ANKRD34AQ69YU3 496 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 HHIPL2Q6UWX4 724 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 G2E3Q7L622 706 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 GPR142Q7Z601 462 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 SULF2Q8IWU5 870 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 SMG8Q8ND04 991 aaKnown RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 WDR89Q96FK6 387 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 CEP41Q9BYV8 373 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 PUS3Q9BZE2 481 aaKnown RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 CCDC86Q9H6F5 360 aaKnown RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 KMT2BQ9UMN6 2715 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-209ENST00000589941 PARP14Q460N5 1801 aa9.66□□□□□ -0.86
SMAD4-209ENST00000589941 UTYO14607 1347 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-209ENST00000589941 TIAF1O95411 115 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 GSTP1P09211 210 aaKnown RBP9.65□□□□□ -0.86
SMAD4-209ENST00000589941 CLTBP09497 229 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 CYBAP13498 195 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 DRD2P14416 443 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 CYP2C19P33261 490 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 ADCYAP1R1P41586 468 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 RGS3P49796 1198 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 HNRNPUQ00839 825 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMAD4-209ENST00000589941 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
SMAD4-209ENST00000589941 RRP1BQ14684 758 aaKnown RBP9.65□□□□□ -0.86
SMAD4-209ENST00000589941 RASIP1Q5U651 963 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 KRT40Q6A162 431 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 FDX2Q6P4F2 183 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 CCDC129Q6ZRS4 1044 aa9.65□□□□□ -0.86
SMAD4-209ENST00000589941 C16orf59Q7L2K0 433 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms