RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CERS4Q9HA82 394 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 PRDM6Q9NQX0 595 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 V9GY48 417 aaPredicted RBP16.44■□□□□ 0.22
MBD1-220ENST00000589758 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 AMHP03971 560 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 ADAM17P78536 824 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 MRPS5P82675 430 aaKnown RBP16.43■□□□□ 0.22
MBD1-220ENST00000589758 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 FUT2Q10981 343 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 TCTN1Q2MV58 587 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 LMBR1Q8WVP7 490 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 SEPT8Q92599 483 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 ASB2Q96Q27 587 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 ERAP1Q9NZ08 941 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 TELO2Q9Y4R8 837 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 MTCH2Q9Y6C9 303 aa16.43■□□□□ 0.22
MBD1-220ENST00000589758 CCDC196A0A1B0GTZ2 297 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 RFXAPO00287 272 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 ADCY7P51828 1080 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 FAM26DQ5JW98 314 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 TAF2Q6P1X5 1199 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 TMCO2Q7Z6W1 182 aaPredicted RBP16.42■□□□□ 0.22
MBD1-220ENST00000589758 RPAINQ86UA6 219 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 GLG1Q92896 1179 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 KCNB2Q92953 911 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
MBD1-220ENST00000589758 MXRA8Q9BRK3 442 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 BARHL2Q9NY43 387 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 INSL6Q9Y581 213 aa16.42■□□□□ 0.22
MBD1-220ENST00000589758 KAT6AQ92794 2004 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 EYSQ5T1H1 3165 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 LCHNA4D1U4 455 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 EPOPA6NHQ4 379 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 STXBP3O00186 592 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 ARHGEF15O94989 841 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 RPLP2P05387 115 aaKnown RBP16.41■□□□□ 0.22
MBD1-220ENST00000589758 CTSHP09668 335 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 CDC27P30260 824 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 PPFIA1Q13136 1202 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 APBB2Q92870 758 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 JPH1Q9HDC5 661 aaPredicted RBP16.41■□□□□ 0.22
MBD1-220ENST00000589758 KCNH7Q9NS40 1196 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
MBD1-220ENST00000589758 LMCD1Q9NZU5 365 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 PKD2L1Q9P0L9 805 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
MBD1-220ENST00000589758 NFASCO94856 1347 aa16.41■□□□□ 0.22
MBD1-220ENST00000589758 HSPA4P34932 840 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
MBD1-220ENST00000589758 ERVK-21P61565 698 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 GRB10Q13322 594 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 MKRN4PQ13434 485 aaPredicted RBP16.4■□□□□ 0.22
MBD1-220ENST00000589758 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
MBD1-220ENST00000589758 RSPH3Q86UC2 560 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 MYOCDQ8IZQ8 938 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
MBD1-220ENST00000589758 MICAL3Q7RTP6 2002 aa16.4■□□□□ 0.22
MBD1-220ENST00000589758 RRN3P2A6NIE6 340 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 REC8O95072 547 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 CLK2P49760 499 aaKnown RBP16.39■□□□□ 0.21
MBD1-220ENST00000589758 SKIV2LQ15477 1246 aaKnown RBP16.39■□□□□ 0.21
MBD1-220ENST00000589758 GRIK4Q16099 956 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
MBD1-220ENST00000589758 CEP55Q53EZ4 464 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 FAM117BQ6P1L5 589 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 Q6ZUG5 572 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 FBXL16Q8N461 479 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
MBD1-220ENST00000589758 ANO3Q9BYT9 981 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 AZI2Q9H6S1 392 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 TUBE1Q9UJT0 475 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
MBD1-220ENST00000589758 MBLAC1A4D2B0 266 aaPredicted RBP16.38■□□□□ 0.21
MBD1-220ENST00000589758 LINC01553A4QN01 128 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 MARK3P27448 753 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 PSMA5P28066 241 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
MBD1-220ENST00000589758 ZNF76P36508 570 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 SREBF1P36956 1147 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 HTRA4P83105 476 aaPredicted RBP16.38■□□□□ 0.21
MBD1-220ENST00000589758 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 NIPA1Q7RTP0 329 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 CYP2W1Q8TAV3 490 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
MBD1-220ENST00000589758 BRF1Q92994 677 aa16.38■□□□□ 0.21
MBD1-220ENST00000589758 TOP1MTQ969P6 601 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms