RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MTFR1Q15390 333 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 PPTC7Q8NI37 304 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 CLIC6Q96NY7 704 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 GPR20Q99678 358 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 MCOLN1Q9GZU1 580 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 CSRNP2Q9H175 543 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 SYNRGQ9UMZ2 1314 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 POTEFA5A3E0 1075 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 EML1O00423 815 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 GJA9P57773 515 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 RDM1Q8NG50 284 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 AK8Q96MA6 479 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 RNF208Q9H0X6 261 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
ATG4D-211ENST00000589753 SPC25Q9HBM1 224 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 XPNPEP3Q9NQH7 507 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 PAK6Q9NQU5 681 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-211ENST00000589753 DISC1Q9NRI5 854 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 TELO2Q9Y4R8 837 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 PCDHA10Q9Y5I2 948 aa17.08■□□□□ 0.32
ATG4D-211ENST00000589753 GSTTP1A0A1W2PQM5 241 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 ATG7O95352 703 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 PSAPP07602 524 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 C6orf222P0C671 652 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-211ENST00000589753 CPT1AP50416 773 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 EPHA7Q15375 998 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 BRDTQ58F21 947 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-211ENST00000589753 AXDND1Q5T1B0 1012 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-211ENST00000589753 LHX8Q68G74 356 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 ABHD15Q6UXT9 468 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
ATG4D-211ENST00000589753 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
ATG4D-211ENST00000589753 A6NJR5 290 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 PP2D1A8MPX8 630 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 ADAMTS4O75173 837 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 PGK1P00558 417 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 MMP3P08254 477 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 SUPT20HL2P0C7V6 817 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 TCF7P36402 384 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-211ENST00000589753 NKX3-2P78367 333 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 FSCN1Q16658 493 aaKnown RBP17.06■□□□□ 0.32
ATG4D-211ENST00000589753 SPECC1Q5M775 1068 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
ATG4D-211ENST00000589753 GOLGA6L4A6NEF3 574 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 CTAGE5O15320 804 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 CDC25AP30304 524 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 UBA7P41226 1012 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 BEX3Q00994 111 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 DGKDQ16760 1214 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 NEK9Q8TD19 979 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 DEFB118Q96PH6 123 aa17.05■□□□□ 0.32
ATG4D-211ENST00000589753 EIF2AK1Q9BQI3 630 aaKnown RBP17.05■□□□□ 0.32
ATG4D-211ENST00000589753 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 A0A1W2PQ27 194 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 A0A1W2PQ64 194 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 A0A1W2PQD8 194 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 MYADML2A6NDP7 307 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 GOLGA6L22H0YM25 854 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 BACH1O14867 736 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
ATG4D-211ENST00000589753 HOXD8P13378 290 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-211ENST00000589753 IRX5P78411 483 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-211ENST00000589753 TPRNQ4KMQ1 711 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 GNASQ5JWF2 1037 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 UTP14CQ5TAP6 766 aaKnown RBP17.04■□□□□ 0.32
ATG4D-211ENST00000589753 SWSAP1Q6NVH7 229 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 RNF180Q86T96 592 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 CABP7Q86V35 215 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 BANK1Q8NDB2 785 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 SYMPKQ92797 1274 aaKnown RBP17.04■□□□□ 0.32
ATG4D-211ENST00000589753 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 EPSTI1Q96J88 318 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-211ENST00000589753 AZI2Q9H6S1 392 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 GABBR1Q9UBS5 961 aa17.04■□□□□ 0.32
ATG4D-211ENST00000589753 FRMPD3Q5JV73 1810 aa17.03■□□□□ 0.32
ATG4D-211ENST00000589753 EMSYQ7Z589 1322 aa17.03■□□□□ 0.32
ATG4D-211ENST00000589753 ZEB2O60315 1214 aa17.03■□□□□ 0.32
ATG4D-211ENST00000589753 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
ATG4D-211ENST00000589753 LGR5O75473 907 aa17.03■□□□□ 0.32
ATG4D-211ENST00000589753 SLITRK3O94933 977 aa17.03■□□□□ 0.32
ATG4D-211ENST00000589753 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-211ENST00000589753 LGALS2P05162 132 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms