RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TDP2O95551 362 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 GCFC2P16383 781 aaKnown RBP24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 DGKDQ16760 1214 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 CXCL17Q6UXB2 119 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 ZNF577Q9BSK1 485 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 CEP131Q9UPN4 1083 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 CYP3A7-CYP3A51PA0A087WV96 503 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 CYP3A7P24462 503 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 SP4Q02446 784 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 HSDL1Q3SXM5 330 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 VTI1AQ96AJ9 217 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 LENG9Q96B70 501 aa24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 JPH1Q9HDC5 661 aaPredicted RBP24.01■■□□□ 1.43
R3HDM4-204ENST00000589428 NFASCO94856 1347 aa24■■□□□ 1.43
R3HDM4-204ENST00000589428 IPO5O00410 1097 aaKnown RBP24■■□□□ 1.43
R3HDM4-204ENST00000589428 GADD45BO75293 160 aaPredicted RBP24■■□□□ 1.43
R3HDM4-204ENST00000589428 BMP15O95972 392 aa24■■□□□ 1.43
R3HDM4-204ENST00000589428 MARCKSP29966 332 aaPredicted RBP24■■□□□ 1.43
R3HDM4-204ENST00000589428 PTGDRQ13258 359 aa24■■□□□ 1.43
R3HDM4-204ENST00000589428 Q4G0T1 1027 aa24■■□□□ 1.43
R3HDM4-204ENST00000589428 BCAS3Q9H6U6 928 aa24■■□□□ 1.43
R3HDM4-204ENST00000589428 DOCK5Q9H7D0 1870 aa24■■□□□ 1.43
R3HDM4-204ENST00000589428 DDX25Q9UHL0 483 aaKnown RBP24■■□□□ 1.43
R3HDM4-204ENST00000589428 ATN1P54259 1190 aaPredicted RBP23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 ATP2C1P98194 919 aaPredicted RBP23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 PURAQ00577 322 aaKnown RBP23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 PPP4R3AQ6IN85 833 aa23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 C4orf32Q8N8J7 132 aa23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 MTG1Q9BT17 334 aaPredicted RBP23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 TCEAL9Q9UHQ7 104 aa23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 MORC2Q9Y6X9 1032 aaPredicted RBP23.99■■□□□ 1.43
R3HDM4-204ENST00000589428 SLC37A4O43826 429 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 PPP6R2O75170 966 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 ME1P48163 572 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 ITGB3BPQ13352 177 aaPredicted RBP23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 ORC2Q13416 577 aaPredicted RBP23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 MBOAT7Q96N66 472 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 SLC9A2Q9UBY0 812 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 NEMFO60524 1076 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 PPFIA4O75335 1185 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 MLLT1Q03111 559 aaPredicted RBP23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 TMEM60Q9H2L4 133 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 TBC1D22BQ9NU19 505 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 PCDHA7Q9UN72 937 aa23.98■■□□□ 1.43
R3HDM4-204ENST00000589428 A0A0U1RQG5 324 aaPredicted RBP23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 MSH4O15457 936 aa23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 HOXD8P13378 290 aaPredicted RBP23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 POTEDQ86YR6 584 aa23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 UIMC1Q96RL1 719 aa23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 GPR20Q99678 358 aa23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 FBXO2Q9UK22 296 aaPredicted RBP23.97■■□□□ 1.43
R3HDM4-204ENST00000589428 DDX39AO00148 427 aaKnown RBP23.96■■□□□ 1.43
R3HDM4-204ENST00000589428 SLC39A5Q6ZMH5 540 aa23.96■■□□□ 1.43
R3HDM4-204ENST00000589428 ZNF286BP0CG31 522 aa23.96■■□□□ 1.43
R3HDM4-204ENST00000589428 UBE2HP62256 183 aa23.96■■□□□ 1.43
R3HDM4-204ENST00000589428 AXDND1Q5T1B0 1012 aaPredicted RBP23.96■■□□□ 1.43
R3HDM4-204ENST00000589428 KATNAL1Q9BW62 490 aa23.96■■□□□ 1.43
R3HDM4-204ENST00000589428 LRRC26Q2I0M4 334 aa23.95■■□□□ 1.42
R3HDM4-204ENST00000589428 TPRNQ4KMQ1 711 aa23.95■■□□□ 1.42
R3HDM4-204ENST00000589428 LRCH2Q5VUJ6 765 aa23.95■■□□□ 1.42
R3HDM4-204ENST00000589428 KRI1Q8N9T8 703 aaKnown RBP23.95■■□□□ 1.42
R3HDM4-204ENST00000589428 SEPT1Q8WYJ6 367 aa23.95■■□□□ 1.42
R3HDM4-204ENST00000589428 SLC5A5Q92911 643 aa23.95■■□□□ 1.42
R3HDM4-204ENST00000589428 LAD1O00515 517 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 MARCH6O60337 910 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 GAS7O60861 476 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 LGALS2P05162 132 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 PTMSP20962 102 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 TCF7P36402 384 aaPredicted RBP23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 PSMC6P62333 389 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 GRIN1Q05586 938 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 SNX17Q15036 470 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 DPF3Q92784 378 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 CLIC6Q96NY7 704 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 RIT2Q99578 217 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 TEKT3Q9BXF9 490 aa23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 SRPRBQ9Y5M8 271 aaKnown RBP23.94■■□□□ 1.42
R3HDM4-204ENST00000589428 DHX15O43143 795 aaKnown RBP23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 F2P00734 622 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 OR52Z1P0C646 297 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 RTP1P59025 263 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 CHMP4BP1P59074 171 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ACTR2P61160 394 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 KRT76Q01546 638 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ITGA7Q13683 1181 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 C1orf53Q5VUE5 145 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ARL6IP4Q66PJ3 421 aaKnown RBP23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ETNPPLQ8TBG4 499 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 MTMR9Q96QG7 549 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 SEZ6LQ9BYH1 1024 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ATP11BQ9Y2G3 1177 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 TELO2Q9Y4R8 837 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 MROH7Q68CQ1 1323 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 IL17AQ16552 155 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 CALCRLQ16602 461 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 UTP14CQ5TAP6 766 aaKnown RBP23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ADALQ6DHV7 355 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 KCNMB3Q9NPA1 279 aa23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 ZNF215Q9UL58 517 aaPredicted RBP23.93■■□□□ 1.42
R3HDM4-204ENST00000589428 SCN10AQ9Y5Y9 1956 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms