RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
VPS25-202ENST00000589219 EHHADHQ08426 723 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 NCBP1Q09161 790 aaKnown RBP11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 STK4Q13043 487 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 CCL15Q16663 113 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 CENPPQ6IPU0 288 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L6PQ6QN14 398 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 CYP26C1Q6V0L0 522 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 TOGARAM2Q6ZUX3 1019 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 ZNF507Q8TCN5 953 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 FAM20AQ96MK3 541 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
VPS25-202ENST00000589219 ZNF341Q9BYN7 854 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 ZCCHC17Q9NP64 241 aaKnown RBP11.07□□□□□ -0.64
VPS25-202ENST00000589219 GINM1Q9NU53 330 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 FCER1AP12319 257 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 MTIF2P46199 727 aaKnown RBP11.06□□□□□ -0.64
VPS25-202ENST00000589219 FXR1P51114 621 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS25-202ENST00000589219 RBM10P98175 930 aaKnown RBP11.06□□□□□ -0.64
VPS25-202ENST00000589219 COASYQ13057 564 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 SNAPC2Q13487 334 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
VPS25-202ENST00000589219 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 FKBP15Q5T1M5 1219 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 TRIM65Q6PJ69 517 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 CCDC65Q8IXS2 484 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 CD99L2Q8TCZ2 262 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 BRI3BPQ8WY22 251 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 DDX12PQ92771 950 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 TUBGCP2Q9BSJ2 902 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 RANBP17Q9H2T7 1088 aaKnown RBP11.06□□□□□ -0.64
VPS25-202ENST00000589219 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
VPS25-202ENST00000589219 PRR12Q9ULL5 1215 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
VPS25-202ENST00000589219 A0A1W2PQJ5 194 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 A0A1W2PRG0 241 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 COBLO75128 1261 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
VPS25-202ENST00000589219 CASQ1P31415 396 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 KRT9P35527 623 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 PPIL2Q13356 520 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 RRP1BQ14684 758 aaKnown RBP11.05□□□□□ -0.64
VPS25-202ENST00000589219 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
VPS25-202ENST00000589219 USH1GQ495M9 461 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 FAM26FQ5R3K3 315 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 ANKRD40Q6AI12 368 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 RAD9BQ6WBX8 426 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 KCNK18Q7Z418 384 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 MYOCDQ8IZQ8 938 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 PDCL2Q8N4E4 241 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 ZKSCAN4Q969J2 545 aaPredicted RBP11.05□□□□□ -0.64
VPS25-202ENST00000589219 ERGIC2Q96RQ1 377 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 DNAJC7Q99615 494 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
VPS25-202ENST00000589219 CAPN11Q9UMQ6 739 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 MRPL11Q9Y3B7 192 aaKnown RBP11.05□□□□□ -0.64
VPS25-202ENST00000589219 RABGAP1Q9Y3P9 1069 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 MYH7BA7E2Y1 1941 aa11.05□□□□□ -0.64
VPS25-202ENST00000589219 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 B4DLN1 442 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 PES1O00541 588 aaKnown RBP11.04□□□□□ -0.64
VPS25-202ENST00000589219 KIF5CO60282 957 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 GNA14O95837 355 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 ASNSP08243 561 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 PLA2G4BP0C869 781 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 IDEP14735 1019 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 GNG11P61952 73 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 JAG1P78504 1218 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 PPATQ06203 517 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 SPIRE1Q08AE8 756 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 TUBB2AQ13885 445 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 KIF22Q14807 665 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 MIGA2Q7L4E1 593 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 DYMQ7RTS9 669 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 OR8K1Q8NGG5 319 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 CPLX3Q8WVH0 158 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 LENG9Q96B70 501 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 DNAJC19Q96DA6 116 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 CEP63Q96MT8 703 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 NUDT12Q9BQG2 462 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 DESI2Q9BSY9 194 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 TUBB2BQ9BVA1 445 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 NOC4LQ9BVI4 516 aaKnown RBP11.04□□□□□ -0.64
VPS25-202ENST00000589219 TTYH3Q9C0H2 523 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 MYO1AQ9UBC5 1043 aa11.04□□□□□ -0.64
VPS25-202ENST00000589219 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms