RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 SLC4A7Q9Y6M7 1214 aa21.91■■□□□ 1.1
CIRBP-221ENST00000589161 CDKL5O76039 1030 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 ARP10275 920 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 NLRP5P59047 1200 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 HIC1Q14526 733 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 SERINC5Q86VE9 423 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 TRIM50Q86XT4 487 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 FAM177A1Q8N128 213 aaPredicted RBP21.9■■□□□ 1.1
CIRBP-221ENST00000589161 SMARCAD1Q9H4L7 1026 aa21.9■■□□□ 1.1
CIRBP-221ENST00000589161 AGO4Q9HCK5 861 aaKnown RBP21.9■■□□□ 1.1
CIRBP-221ENST00000589161 ZBBXA8MT70 800 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 DNAJB2P25686 324 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 TRIM71Q2Q1W2 868 aaKnown RBP21.89■■□□□ 1.09
CIRBP-221ENST00000589161 PLA2G4DQ86XP0 818 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 CRYGNQ8WXF5 182 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 GLG1Q92896 1179 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 FAM161BQ96MY7 647 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 ERAP1Q9NZ08 941 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 TPCN1Q9ULQ1 816 aa21.89■■□□□ 1.09
CIRBP-221ENST00000589161 NRCAMQ92823 1304 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 FAM86B1E9PN63 330 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 ADAMTS3O15072 1205 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 PFKFB2O60825 505 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 FAM86B2P0C5J1 330 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 TIFAQ96CG3 184 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 SETD4Q9NVD3 440 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 MSRAQ9UJ68 235 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 STXBP5LQ9Y2K9 1186 aa21.88■■□□□ 1.09
CIRBP-221ENST00000589161 GRXCR1A8MXD5 290 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 TREHO43280 583 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 THPOP40225 353 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 AK2P54819 239 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 SCRN1Q12765 414 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 ITGB3BPQ13352 177 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-221ENST00000589161 RAB30Q15771 203 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 ZNF618Q5T7W0 954 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 TNPO1Q92973 898 aaKnown RBP21.87■■□□□ 1.09
CIRBP-221ENST00000589161 PBX4Q9BYU1 374 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 C22orf23Q9BZE7 217 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 AZI2Q9H6S1 392 aa21.87■■□□□ 1.09
CIRBP-221ENST00000589161 EMSYQ7Z589 1322 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 LAMA2P24043 3122 aaKnown RBP21.86■■□□□ 1.09
CIRBP-221ENST00000589161 CAND2O75155 1236 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 LGR5O75473 907 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 BAIAP3O94812 1187 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 SEC24BO95487 1268 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 CXCL10P02778 98 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 ACTR2P61160 394 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 SETQ01105 290 aaPredicted RBP21.86■■□□□ 1.09
CIRBP-221ENST00000589161 GALNT17Q6IS24 598 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 RASGRP4Q8TDF6 673 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 WNT8BQ93098 351 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 GUCD1Q96NT3 240 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 TTYH1Q9H313 450 aaPredicted RBP21.86■■□□□ 1.09
CIRBP-221ENST00000589161 PCDHA4Q9UN74 947 aa21.86■■□□□ 1.09
CIRBP-221ENST00000589161 IGLV3-22A0A075B6J6 115 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 RSPH10B2B2RC85 870 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 RSPH10BP0C881 870 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 ATP2A2P16615 1042 aaKnown RBP21.85■■□□□ 1.09
CIRBP-221ENST00000589161 CIITAP33076 1130 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 USP11P51784 963 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 ADAM17P78536 824 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 GPNMBQ14956 572 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 PHOSPHO2Q8TCD6 241 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 LMBR1Q8WVP7 490 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 TBC1D22BQ9NU19 505 aa21.85■■□□□ 1.09
CIRBP-221ENST00000589161 IPO5O00410 1097 aaKnown RBP21.84■■□□□ 1.09
CIRBP-221ENST00000589161 NBNO60934 754 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 ATG7O95352 703 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 MARK3P27448 753 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 PBX2P40425 430 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 NEK4P51957 841 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 PPFIA1Q13136 1202 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 CNKSR3Q6P9H4 555 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 TRAF7Q6Q0C0 670 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 PLPPR4Q7Z2D5 763 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 BLIDQ8IZY5 108 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 SLC9A7Q96T83 725 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 PCYT2Q99447 389 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 CDX2Q99626 313 aaPredicted RBP21.84■■□□□ 1.09
CIRBP-221ENST00000589161 ZNF577Q9BSK1 485 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 ZNF576Q9H609 170 aa21.84■■□□□ 1.09
CIRBP-221ENST00000589161 DOCK5Q9H7D0 1870 aa21.83■■□□□ 1.09
CIRBP-221ENST00000589161 STK36Q9NRP7 1315 aa21.83■■□□□ 1.09
CIRBP-221ENST00000589161 XBP1P17861 261 aa21.83■■□□□ 1.09
CIRBP-221ENST00000589161 STAT5BP51692 787 aa21.83■■□□□ 1.09
CIRBP-221ENST00000589161 PRR16Q569H4 304 aa21.83■■□□□ 1.09
CIRBP-221ENST00000589161 DAGLBQ8NCG7 672 aa21.83■■□□□ 1.09
CIRBP-221ENST00000589161 RRN3P2A6NIE6 340 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 DDX39AO00148 427 aaKnown RBP21.82■■□□□ 1.08
CIRBP-221ENST00000589161 DHX15O43143 795 aaKnown RBP21.82■■□□□ 1.08
CIRBP-221ENST00000589161 KCNJ6P48051 423 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 SLC26A2P50443 739 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 GRIK4Q16099 956 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 TAF2Q6P1X5 1199 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 AIFM3Q96NN9 605 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 TCEAL9Q9UHQ7 104 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 PCDHA11Q9Y5I1 949 aa21.82■■□□□ 1.08
CIRBP-221ENST00000589161 TRIP12Q14669 1992 aaPredicted RBP21.81■■□□□ 1.08
CIRBP-221ENST00000589161 SCN5AQ14524 2016 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms