RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 GOPCQ9HD26 462 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 TUFT1Q9NNX1 390 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 PLCB1Q9NQ66 1216 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 FAM207AQ9NSI2 230 aaPredicted RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 AGPAT5Q9NUQ2 364 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 SEL1LQ9UBV2 794 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 HDAC9Q9UKV0 1011 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 PNMA2Q9UL42 364 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 SNX12Q9UMY4 172 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 L1RE1Q9UN81 338 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 MYH4Q9Y623 1939 aa7.9□□□□□ -1.15
SPIDR-228ENST00000588781 ATRNL1Q5VV63 1379 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 GRID2IPA4D2P6 1211 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 LRRC53A6NM62 1247 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 BTNL10A8MVZ5 291 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 RBAK-RBAKDNI3L0D1 243 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 PIK3CDO00329 1044 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 CES2O00748 559 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 PDXKO00764 312 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 POLR3GO15318 223 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 EIF3DO15371 548 aaKnown RBP eCLIP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 RAD21O60216 631 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 GFPT2O94808 682 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 ATP1A1P05023 1023 aaKnown RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 IVLP07476 585 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 CCDC172P0C7W6 258 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 EPB41P11171 864 aaKnown RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 CYP11B2P19099 503 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 CASP8Q14790 479 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TNIP1Q15025 636 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 LEKR1Q6ZMV7 388 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 KRT26Q7Z3Y9 468 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 FAM160B2Q86V87 743 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TNS4Q8IZW8 715 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 SYT2Q8N9I0 419 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 GOLGA5Q8TBA6 731 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 NEK9Q8TD19 979 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 ZNF526Q8TF50 670 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 LRRC15Q8TF66 581 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 CHURC1Q8WUH1 139 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 LMBR1Q8WVP7 490 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TAF4BQ92750 862 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 ZNF622Q969S3 477 aaKnown RBP eCLIP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 LSM14BQ9BX40 385 aaKnown RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 ABCB6Q9NP58 842 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TYW1Q9NV66 732 aaKnown RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 KCND2Q9NZV8 630 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 ARMCX3Q9UH62 379 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 FBXL5Q9UKA1 691 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 TRAF3IP3Q9Y228 551 aa7.89□□□□□ -1.15
SPIDR-228ENST00000588781 MRPL11Q9Y3B7 192 aaKnown RBP7.89□□□□□ -1.15
SPIDR-228ENST00000588781 ANKRD31Q8N7Z5 1873 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 MACROD2A1Z1Q3 448 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 GTPBP10A4D1E9 387 aaKnown RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 RASSF10A6NK89 507 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 F5H6K3 240 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 OPA1O60313 960 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 ECE2O60344 883 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 PLA2G6O60733 806 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 PPP1R11O60927 126 aaPredicted RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 EYA4O95677 639 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 AFPP02771 609 aaKnown RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 TNFRSF8P28908 595 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 SLC16A2P36021 539 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 TNNT3P45378 269 aaPredicted RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 AARSP49588 968 aaKnown RBP eCLIP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 SLC12A3P55017 1021 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 NAP1L1P55209 391 aaKnown RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 VSNL1P62760 191 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 SETQ01105 290 aaPredicted RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 APBA1Q02410 837 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 KLRC3Q07444 240 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 KLHL30Q0D2K2 578 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 NNTQ13423 1086 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 ADAM9Q13443 819 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 ALCAMQ13740 583 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 CLUL1Q15846 466 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 NFIL3Q16649 462 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 KNOP1Q1ED39 458 aaKnown RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 BMT2Q1RMZ1 405 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 CFAP221Q4G0U5 840 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 DACT2Q5SW24 774 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 FAM83BQ5T0W9 1011 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 NCAPH2Q6IBW4 605 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 GBP6Q6ZN66 633 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 SAMD3Q8N6K7 520 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 BAP1Q92560 729 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 CCDC102AQ96A19 550 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 SPAG5Q96R06 1193 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 PNKPQ96T60 521 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 MKNK1Q9BUB5 465 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 SELENOOQ9BVL4 669 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 WDR11Q9BZH6 1224 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 TSPYL1Q9H0U9 437 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms