RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 LCHNA4D1U4 455 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 H7BY64 318 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 PMM2O15305 246 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 ADCY1Q08828 1119 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 SPIRE1Q08AE8 756 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 CYP27C1Q4G0S4 372 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 HHIPL2Q6UWX4 724 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 B3GNT9Q6UX72 402 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 PPM1EQ8WY54 764 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 RNF38Q9H0F5 515 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 CSRNP2Q9H175 543 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 DNAJC28Q9NX36 388 aa9.64□□□□□ -0.87
VMP1-208ENST00000588617 SCDO00767 359 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 WDHD1O75717 1129 aaPredicted RBP9.63□□□□□ -0.87
VMP1-208ENST00000588617 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 ENDOUP21128 410 aaKnown RBP9.63□□□□□ -0.87
VMP1-208ENST00000588617 SERPINB3P29508 390 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 ZNF267Q14586 743 aaPredicted RBP9.63□□□□□ -0.87
VMP1-208ENST00000588617 FSTL4Q6MZW2 842 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 CYP2R1Q6VVX0 501 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 RNF111Q6ZNA4 994 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 PARD3BQ8TEW8 1205 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 DPF3Q92784 378 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 TAAR9Q96RI9 348 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 ZSWIM5Q9P217 1185 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 PHTF1Q9UMS5 762 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
VMP1-208ENST00000588617 TCRBV5S4A2TA0A5A2 114 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 HMGB1P1B2RPK0 211 aaPredicted RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 NRDCO43847 1150 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 PTX3P26022 381 aaPredicted RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 ZNF280AP59817 542 aaPredicted RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 ZPBP2Q6X784 338 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 CATIPQ7Z7H3 387 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 NLRP10Q86W26 655 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 MIER2Q8N344 545 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 PNISRQ8TF01 805 aaKnown RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 TRMT2BQ96GJ1 504 aaKnown RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 ACAP3Q96P50 834 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 NACC1Q96RE7 527 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 ACSS2Q9NR19 701 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 GNL3LQ9NVN8 582 aaKnown RBP9.62□□□□□ -0.87
VMP1-208ENST00000588617 ADGRE2Q9UHX3 823 aa9.62□□□□□ -0.87
VMP1-208ENST00000588617 CNTNAP5Q8WYK1 1306 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
VMP1-208ENST00000588617 MYBP10242 640 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 CD40P25942 277 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 LTKP29376 864 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 ADMP35318 185 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 INO80DQ53TQ3 878 aaPredicted RBP9.61□□□□□ -0.87
VMP1-208ENST00000588617 FAM83BQ5T0W9 1011 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 CPZQ66K79 652 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 ARHGAP27Q6ZUM4 889 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 CHST15Q7LFX5 561 aaPredicted RBP9.61□□□□□ -0.87
VMP1-208ENST00000588617 NOSTRINQ8IVI9 506 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 ZZZ3Q8IYH5 903 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 DZIP1LQ8IYY4 767 aaKnown RBP9.61□□□□□ -0.87
VMP1-208ENST00000588617 GATA6Q92908 595 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 MEGF10Q96KG7 1140 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 TNIP3Q96KP6 325 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 DUSP13Q9UII6 198 aa9.61□□□□□ -0.87
VMP1-208ENST00000588617 MAN2B1O00754 1011 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 DHX15O43143 795 aaKnown RBP9.6□□□□□ -0.87
VMP1-208ENST00000588617 CYP17A1P05093 508 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 MYL3P08590 195 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 FPR2P25090 351 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 USP14P54578 494 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 IFI16Q16666 785 aaKnown RBP9.6□□□□□ -0.87
VMP1-208ENST00000588617 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 OTOP3Q7RTS5 596 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 CLEC10AQ8IUN9 316 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 TEX2Q8IWB9 1127 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 VPS37AQ8NEZ2 397 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 GJA10Q969M2 543 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 MAF1Q9H063 256 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 MARCH2Q9P0N8 246 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 PNMA2Q9UL42 364 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 PTPN22Q9Y2R2 807 aa9.6□□□□□ -0.87
VMP1-208ENST00000588617 H3BS24 57 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 TCEA3O75764 348 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 RHCEP18577 417 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
VMP1-208ENST00000588617 RHDQ02161 417 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 RAPGEF1Q13905 1077 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 TOR2AQ5JU69 321 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 ESRP1Q6NXG1 681 aaKnown RBP9.59□□□□□ -0.87
VMP1-208ENST00000588617 ZAR1Q86SH2 424 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 UBE2FQ969M7 185 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 ORAI2Q96SN7 254 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 FAM83CQ9BQN1 747 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 EPB41L1Q9H4G0 881 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 PLCB1Q9NQ66 1216 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 GULP1Q9UBP9 304 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 MSRAQ9UJ68 235 aa9.59□□□□□ -0.87
VMP1-208ENST00000588617 COA3Q9Y2R0 106 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms