RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TCF7P36402 384 aaPredicted RBP11.96□□□□□ -0.49
TPM4-209ENST00000588483 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
TPM4-209ENST00000588483 ITGB3BPQ13352 177 aaPredicted RBP11.96□□□□□ -0.49
TPM4-209ENST00000588483 JAKMIP3Q5VZ66 844 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 TRAF7Q6Q0C0 670 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 PPP1R13LQ8WUF5 828 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 SCLYQ96I15 445 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 LARP6Q9BRS8 491 aaKnown RBP11.96□□□□□ -0.49
TPM4-209ENST00000588483 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 SLKQ9H2G2 1235 aaPredicted RBP11.96□□□□□ -0.49
TPM4-209ENST00000588483 SLC9A2Q9UBY0 812 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 IGKV6D-21A0A0A0MT36 114 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.95□□□□□ -0.5
TPM4-209ENST00000588483 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.95□□□□□ -0.5
TPM4-209ENST00000588483 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 DHX15O43143 795 aaKnown RBP11.95□□□□□ -0.5
TPM4-209ENST00000588483 EDIL3O43854 480 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 PPFIA3O75145 1194 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 FGBP02675 491 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 CXCL10P02778 98 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 ACRP10323 421 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 CKBP12277 381 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 SELPP16109 830 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 USP11P51784 963 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 STK3Q13188 491 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 GPNMBQ14956 572 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 RPAINQ86UA6 219 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 RETREG2Q8NC44 543 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 GTF3C6Q969F1 213 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 LENG9Q96B70 501 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
TPM4-209ENST00000588483 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 ERAP1Q9NZ08 941 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
TPM4-209ENST00000588483 MBLAC1A4D2B0 266 aaPredicted RBP11.94□□□□□ -0.5
TPM4-209ENST00000588483 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 GNAT1P11488 350 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 SLC26A2P50443 739 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 NEK4P51957 841 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 NLRP5P59047 1200 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 CHMP4BP1P59074 171 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 ZNF200P98182 395 aaPredicted RBP11.94□□□□□ -0.5
TPM4-209ENST00000588483 ME3Q16798 604 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 MOXD1Q6UVY6 613 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 LRRC8DQ7L1W4 858 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 PLPPR4Q7Z2D5 763 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 PLA2G4DQ86XP0 818 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 RASGRP4Q8TDF6 673 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 WNT8BQ93098 351 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 AIFM3Q96NN9 605 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 PCYT2Q99447 389 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 SDF4Q9BRK5 362 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 PHF20Q9BVI0 1012 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 SMARCAD1Q9H4L7 1026 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 MTMR10Q9NXD2 777 aa11.94□□□□□ -0.5
TPM4-209ENST00000588483 CXXC1Q9P0U4 656 aaPredicted RBP11.94□□□□□ -0.5
TPM4-209ENST00000588483 EYSQ5T1H1 3165 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 CYP3A7-CYP3A51PA0A087WV96 503 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
TPM4-209ENST00000588483 BAIAP3O94812 1187 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 LARGE1O95461 756 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 CYP3A7P24462 503 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 ZNF76P36508 570 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 RBM25P49756 843 aaKnown RBP11.93□□□□□ -0.5
TPM4-209ENST00000588483 ACTR2P61160 394 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 SP4Q02446 784 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
TPM4-209ENST00000588483 ABHD15Q6UXT9 468 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 BLIDQ8IZY5 108 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 DEFB123Q8N688 67 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 IL27Q8NEV9 243 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 LMBR1Q8WVP7 490 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 MBOAT7Q96N66 472 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 KIF2CQ99661 725 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
TPM4-209ENST00000588483 WDR81Q562E7 1941 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 GBF1Q92538 1859 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 TREHO43280 583 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 NBNO60934 754 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 CCNE2O96020 404 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
TPM4-209ENST00000588483 ACTN1P12814 892 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 FDPSP14324 419 aaKnown RBP11.92□□□□□ -0.5
TPM4-209ENST00000588483 XBP1P17861 261 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 DNAJB2P25686 324 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 MBTPS1Q14703 1052 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 Q4G0T1 1027 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 ZNF618Q5T7W0 954 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 ZNF746Q6NUN9 644 aaPredicted RBP11.92□□□□□ -0.5
TPM4-209ENST00000588483 TAF2Q6P1X5 1199 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 Q7L0L9 218 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 OTOP2Q7RTS6 562 aa11.92□□□□□ -0.5
TPM4-209ENST00000588483 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
TPM4-209ENST00000588483 NSUN7Q8NE18 718 aaKnown RBP11.92□□□□□ -0.5
TPM4-209ENST00000588483 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms