RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 GDF3Q9NR23 364 aa17.1■□□□□ 0.33
TPGS1-202ENST00000588278 GGA1Q9UJY5 639 aa17.1■□□□□ 0.33
TPGS1-202ENST00000588278 KLRC4O43908 158 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 PALMO75781 387 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 TNNI2P48788 182 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 CFAP221Q4G0U5 840 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 TSGA10Q9BZW7 698 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 C6orf50Q9HD87 102 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 GGT7Q9UJ14 662 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 EME2A4GXA9 379 aaPredicted RBP17.09■□□□□ 0.33
TPGS1-202ENST00000588278 PALM3A6NDB9 673 aaPredicted RBP17.09■□□□□ 0.33
TPGS1-202ENST00000588278 SLC16A2P36021 539 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 ZNF662Q6ZS27 426 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 PYM1Q9BRP8 204 aaKnown RBP17.09■□□□□ 0.33
TPGS1-202ENST00000588278 THAP9Q9H5L6 903 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
TPGS1-202ENST00000588278 NOVA2Q9UNW9 492 aaKnown RBP17.09■□□□□ 0.33
TPGS1-202ENST00000588278 POTEMA6NI47 508 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 GOLGA6L10A6NI86 522 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 HSD17B3P37058 310 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 BIRC2Q13490 618 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.33
TPGS1-202ENST00000588278 UBLCP1Q8WVY7 318 aaPredicted RBP17.08■□□□□ 0.33
TPGS1-202ENST00000588278 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 FLT1P17948 1338 aa17.08■□□□□ 0.33
TPGS1-202ENST00000588278 UAP1Q16222 522 aaPredicted RBP17.08■□□□□ 0.32
TPGS1-202ENST00000588278 RAPGEF5Q92565 580 aa17.08■□□□□ 0.32
TPGS1-202ENST00000588278 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
TPGS1-202ENST00000588278 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 TDP2O95551 362 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 CLTAP09496 248 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 MYZAPP0CAP1 466 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 ERVK-9P63128 1117 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 UBE2SQ16763 222 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 NEK8Q86SG6 692 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 REXO1Q8N1G1 1221 aaKnown RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 HVCN1Q96D96 273 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 AP1M1Q9BXS5 423 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 ZNF287Q9HBT7 754 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 TMBIM4Q9HC24 238 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 LRRC41Q15345 812 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 DPP8Q6V1X1 898 aaPredicted RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 ZNF572Q7Z3I7 529 aaPredicted RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 CPLX4Q7Z7G2 160 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 PLAGL2Q9UPG8 496 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 FAM196BA6NMK8 535 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 HMGB1P1B2RPK0 211 aaPredicted RBP17.07■□□□□ 0.32
TPGS1-202ENST00000588278 SERPINB2P05120 415 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 SLC12A6Q9UHW9 1150 aa17.07■□□□□ 0.32
TPGS1-202ENST00000588278 NRAPQ86VF7 1730 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 M0R2N6 131 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 PPP1R12AO14974 1030 aaPredicted RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 GNA11P29992 359 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 MAGOHP61326 146 aaKnown RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 TLDC1Q6P9B6 456 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 CACNA2D3Q8IZS8 1091 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 P2RX5Q93086 422 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 MAGOHBQ96A72 148 aaKnown RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 BUB1BO60566 1050 aaPredicted RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 MYBL1P10243 752 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 GCKP35557 465 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 ITIH3Q06033 890 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
TPGS1-202ENST00000588278 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 CALML4Q96GE6 196 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 NOX5Q96PH1 765 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 NUP58Q9BVL2 599 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 NOD2Q9HC29 1040 aa17.06■□□□□ 0.32
TPGS1-202ENST00000588278 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 A6NNZ2 444 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 G3V3G9 751 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 RTN2O75298 545 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 VPS72Q15906 364 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 TUBB8Q3ZCM7 444 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
TPGS1-202ENST00000588278 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 TTBK2Q6IQ55 1244 aa17.05■□□□□ 0.32
TPGS1-202ENST00000588278 TBC1D1Q86TI0 1168 aaPredicted RBP17.05■□□□□ 0.32
TPGS1-202ENST00000588278 GIMAP8Q8ND71 665 aaPredicted RBP17.05■□□□□ 0.32
TPGS1-202ENST00000588278 ZMYND12Q9H0C1 365 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms