RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PRR20DP86480 221 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PRR20BP86481 221 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PRR20AP86496 221 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 MAP2K1Q02750 393 aaPredicted RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 LRMPQ12912 555 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 TRAF1Q13077 416 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PNOCQ13519 176 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PTPN14Q15678 1187 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 SLC4A8Q2Y0W8 1093 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 CCDC144BQ3MJ40 725 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 COL13A1Q5TAT6 717 aaPredicted RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 TRIM67Q6ZTA4 783 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 TMEM179Q6ZVK1 233 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 Q6ZVU0 165 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 TMC6Q7Z403 805 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 FILIP1Q7Z7B0 1213 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 ANKRD13AQ8IZ07 590 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 BLIDQ8IZY5 108 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 ZNF713Q8N859 430 aaPredicted RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 TSEN2Q8NCE0 465 aaKnown RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 CTAGE1Q96RT6 745 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 WRNIP1Q96S55 665 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 TMEM47Q9BQJ4 181 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 SPZ1Q9BXG8 430 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 CSRNP2Q9H175 543 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 SERTAD1Q9UHV2 236 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 MAN1B1Q9UKM7 699 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PCDHA4Q9UN74 947 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 STX8Q9UNK0 236 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 HRH3Q9Y5N1 445 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 IGKV6D-41A0A0C4DH26 115 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CCDC194A0A1B0GVG4 234 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 PHF20L1A8MW92 1017 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 SMIM22K7EJ46 135 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 ZSCAN12O43309 604 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CTIFO43310 598 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 PRMT3O60678 531 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CTNND1O60716 968 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 ADH1AP07327 375 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 PARP1P09874 1014 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 TNNT1P13805 278 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CDK11BP21127 795 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 GNA11P29992 359 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 SHMT1P34896 483 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 PRPHP41219 470 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CCZ1BP86790 482 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CCZ1P86791 482 aaPredicted RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 FOXC1Q12948 553 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 RRP1BQ14684 758 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 ABCB5Q2M3G0 1257 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 SHROOM1Q2M3G4 852 aaPredicted RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 GLIPR1L2Q4G1C9 344 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 GPATCH4Q5T3I0 446 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 SPATA1Q5VX52 437 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CEP135Q66GS9 1140 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 DCAF15Q66K64 600 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 SND1Q7KZF4 910 aaKnown RBP eCLIP6.46□□□□□ -1.385e-8■■■■□ 19.6
SDF2-206ENST00000587788 CCDC84Q86UT8 332 aaPredicted RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 VSTM4Q8IW00 320 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CCAR2Q8N163 923 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 CMTR1Q8N1G2 835 aaKnown RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 KIF18AQ8NI77 898 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 OPTNQ96CV9 577 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 AK8Q96MA6 479 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 ZNF341Q9BYN7 854 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 R3HDMLQ9H3Y0 253 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 CUEDC2Q9H467 287 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 DNAJC18Q9H819 358 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 MAGEF1Q9HAY2 307 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 BARHL2Q9NY43 387 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 ZNF112Q9UJU3 913 aa6.46□□□□□ -1.38
SDF2-206ENST00000587788 COL11A1P12107 1806 aaPredicted RBP6.46□□□□□ -1.38
SDF2-206ENST00000587788 RLFQ13129 1914 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 J3QL48 77 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 IGF2BP3O00425 579 aaKnown RBP eCLIP6.45□□□□□ -1.38
SDF2-206ENST00000587788 MPHOSPH10O00566 681 aaKnown RBP6.45□□□□□ -1.38
SDF2-206ENST00000587788 TRPA1O75762 1119 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 ASNSP08243 561 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 ZBTB48P10074 688 aaPredicted RBP6.45□□□□□ -1.38
SDF2-206ENST00000587788 ZNF18P17022 549 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 ATP2B1P20020 1258 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 IGFBP4P22692 258 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 CAP2P40123 477 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 PPP1R2P41236 205 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 CTCFP49711 727 aaPredicted RBP6.45□□□□□ -1.38
SDF2-206ENST00000587788 JAG1P78504 1218 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 FOXK2Q01167 660 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 SPAG1Q07617 926 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 MTFR1Q15390 333 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 ZNF174Q15697 407 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 NPY5RQ15761 445 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 FILIP1LQ4L180 1135 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 ASPRV1Q53RT3 343 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 SPECC1LQ69YQ0 1117 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 KRT25Q7Z3Z0 450 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 TEX2Q8IWB9 1127 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 C17orf53Q8N3J3 647 aaPredicted RBP6.45□□□□□ -1.38
SDF2-206ENST00000587788 ANKRD20A12PQ8NF67 263 aa6.45□□□□□ -1.38
SDF2-206ENST00000587788 ERCC4Q92889 916 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms