RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 TRIM59Q8IWR1 403 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 DHX37Q8IY37 1157 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 NIM1KQ8IY84 436 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 SHISA5Q8N114 240 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 ARHGEF39Q8N4T4 335 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 TOP6BLQ8N6T0 577 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 KCNH5Q8NCM2 988 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 LINC00116Q8NCU8 138 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 BTN2A2Q8WVV5 523 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 BRF1Q92994 677 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 PPP1R14AQ96A00 147 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 MFSD3Q96ES6 412 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 RCC1LQ96I51 464 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 Q96M66 194 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 ASPNQ9BXN1 380 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 PRDM14Q9GZV8 571 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 GBP3Q9H0R5 595 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 LRP2BPQ9P2M1 347 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 ZNF292O60281 2723 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 NRXN2Q9P2S2 1712 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 MRC1P22897 1456 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 DMDP11532 3685 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 FAM95CA0A1B0GW59 222 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 FZD9O00144 591 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 PLD2O14939 933 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 PRODHO43272 600 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 PPM1BO75688 479 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 TBC1D8O95759 1140 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 ITGA4P13612 1032 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 SDSP20132 328 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 IBSPP21815 317 aaPredicted RBP4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 RFC4P35249 363 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 ADMP35318 185 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 STAT3P40763 770 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 ETV3P41162 512 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 DDR1Q08345 913 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 MAP7Q14244 749 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 TMC3Q7Z5M5 1100 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 UBE2Q1Q7Z7E8 422 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 RNF180Q86T96 592 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 C1orf159Q96HA4 380 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 HEXIM2Q96MH2 286 aaKnown RBP4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 CDX2Q99626 313 aaPredicted RBP4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 CDC6Q99741 560 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 IER2Q9BTL4 223 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 GFOD1Q9NXC2 390 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 KLHL42Q9P2K6 505 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 PGAP2Q9UHJ9 254 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 MINPP1Q9UNW1 487 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 SUGT1Q9Y2Z0 365 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 PCDHB12Q9Y5F1 795 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 FHOD1Q9Y613 1164 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 U3KQE9 123 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 FAM208AQ9UK61 1670 aaKnown RBP4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 ZNF609O15014 1411 aa4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 TPRP12270 2363 aaKnown RBP4.38□□□□□ -1.71
LDLRAD4-209ENST00000587440 LTN1O94822 1766 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 LAMB2P55268 1798 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 FAM208BQ5VWN6 2430 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 CCDC163A0A0D9SF12 145 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 SHISA3A0PJX4 238 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 WTIPA6NIX2 430 aaPredicted RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 GSG1L2A8MUP6 293 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 H0YIN7 160 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 DLX3O60479 287 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 PDE8AO60658 829 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 KCNH1O95259 989 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 MYCLP1P12525 358 aaPredicted RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 FOSL2P15408 326 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 GFRA1P56159 465 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 ANAPC15P60006 121 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 SUMO1P63165 101 aaKnown RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 SAFB2Q14151 953 aaKnown RBP eCLIP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 NTRK3Q16288 839 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 FNDC3BQ53EP0 1204 aaKnown RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 TRIM61Q5EBN2 209 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 NSMFQ6X4W1 530 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 BEND4Q6ZU67 534 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 C22orf34Q6ZV56 151 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 JAMLQ86YT9 394 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 SCUBE1Q8IWY4 988 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 FIBCD1Q8N539 461 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 DTWD2Q8NBA8 298 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 SYTL5Q8TDW5 730 aaPredicted RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 ASB2Q96Q27 587 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 FAM83CQ9BQN1 747 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 YIPF2Q9BWQ6 316 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 MRPL4Q9BYD3 311 aaKnown RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 GLIS2Q9BZE0 524 aaPredicted RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 NOL6Q9H6R4 1146 aaKnown RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 C7orf69Q9H7B7 122 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 CWC22Q9HCG8 908 aaKnown RBP4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 TRIM39Q9HCM9 518 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 POGKQ9P215 609 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 AKT3Q9Y243 479 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 NUP155O75694 1391 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 KDM3BQ7LBC6 1761 aa4.37□□□□□ -1.71
LDLRAD4-209ENST00000587440 ARFGEF2Q9Y6D5 1785 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms