RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 PIK3C2AO00443 1686 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 ST20-MTHFSA0A0A6YYL1 179 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 FGF10O15520 208 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-204ENST00000586792 L1CAMP32004 1257 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 PSMD2Q13200 908 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 FAM26FQ5R3K3 315 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 FBXO27Q8NI29 283 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 ZNF747Q9BV97 191 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 RNF19AQ9NV58 838 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 BTG4Q9NY30 223 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 BCL9LQ86UU0 1499 aa6.34□□□□□ -1.4
ZNF540-204ENST00000586792 KIAA0232Q92628 1395 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 ZBTB7AO95365 584 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 GLI4P10075 376 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 TACR1P25103 407 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 EVA1CP58658 441 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 ZC3H6P61129 1189 aaKnown RBP6.33□□□□□ -1.4
ZNF540-204ENST00000586792 EAPPQ56P03 285 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-204ENST00000586792 LINC00482Q8N8I6 264 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 KCNH5Q8NCM2 988 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 UBE2Q2Q8WVN8 375 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 PEX11GQ96HA9 241 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 BRMS1Q9HCU9 246 aa6.33□□□□□ -1.4
ZNF540-204ENST00000586792 TTC21BQ7Z4L5 1316 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 SLIT3O75094 1523 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 MINDY4BA8MYZ0 360 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 TLR3O15455 904 aaKnown RBP6.32□□□□□ -1.4
ZNF540-204ENST00000586792 RPL13P26373 211 aaKnown RBP6.32□□□□□ -1.4
ZNF540-204ENST00000586792 DAB2P98082 770 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 VPS72Q15906 364 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 LRRFIP1Q32MZ4 808 aaKnown RBP6.32□□□□□ -1.4
ZNF540-204ENST00000586792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.32□□□□□ -1.4
ZNF540-204ENST00000586792 TMEM192Q8IY95 271 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 C7orf61Q8IZ16 206 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 DHRS1Q96LJ7 313 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 SLC6A18Q96N87 628 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 KLC2Q9H0B6 622 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 PARP2Q9UGN5 583 aa6.32□□□□□ -1.4
ZNF540-204ENST00000586792 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
ZNF540-204ENST00000586792 GLI3P10071 1580 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 USP19O94966 1318 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 FAM83GA6ND36 823 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 GCP02774 474 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 GARTP22102 1010 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 CDSNQ15517 529 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 CHRNA2Q15822 529 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 LIMS2Q7Z4I7 341 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 PTCHD1Q96NR3 888 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 CPSF1Q10570 1443 aaKnown RBP6.31□□□□□ -1.4
ZNF540-204ENST00000586792 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 CPDO75976 1380 aa6.31□□□□□ -1.4
ZNF540-204ENST00000586792 AMHP03971 560 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 CTSHP09668 335 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 CYP2C8P10632 490 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
ZNF540-204ENST00000586792 RBM10P98175 930 aaKnown RBP6.3□□□□□ -1.4
ZNF540-204ENST00000586792 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
ZNF540-204ENST00000586792 FAM177A1Q8N128 213 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-204ENST00000586792 NETO2Q8NC67 525 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 TESK2Q96S53 571 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 SLC12A5Q9H2X9 1139 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 HS3ST3A1Q9Y663 406 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 SSH2Q76I76 1423 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 ANKRD36BQ8N2N9 1353 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 USP54Q70EL1 1684 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 LMO7Q8WWI1 1683 aa6.3□□□□□ -1.4
ZNF540-204ENST00000586792 KIF20BQ96Q89 1820 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 LTN1O94822 1766 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 TNFRSF10CO14798 259 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 NOL9Q5SY16 702 aaKnown RBP6.29□□□□□ -1.4
ZNF540-204ENST00000586792 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 DHX37Q8IY37 1157 aaKnown RBP6.29□□□□□ -1.4
ZNF540-204ENST00000586792 DDX11Q96FC9 970 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 COG3Q96JB2 828 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 BCAS3Q9H6U6 928 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 SUPT16HQ9Y5B9 1047 aaKnown RBP6.29□□□□□ -1.4
ZNF540-204ENST00000586792 ABCC6O95255 1503 aa6.29□□□□□ -1.4
ZNF540-204ENST00000586792 COL5A2P05997 1499 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-204ENST00000586792 CD163L1Q9NR16 1453 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 SPATA31A5Q5VU36 1347 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 SPATA31A7Q8IWB4 1347 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 CRB1P82279 1406 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 BRWD3Q6RI45 1802 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 LAMTOR5O43504 91 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 CANXP27824 592 aaKnown RBP6.28□□□□□ -1.4
ZNF540-204ENST00000586792 TOM1L2Q6ZVM7 507 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 KRT27Q7Z3Y8 459 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 NME9Q86XW9 330 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 LCORQ96JN0 433 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-204ENST00000586792 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 MYOM1P52179 1685 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 AATKQ6ZMQ8 1374 aa6.28□□□□□ -1.4
ZNF540-204ENST00000586792 SPATA31A1Q5TZJ5 1347 aa6.27□□□□□ -1.41
ZNF540-204ENST00000586792 THSD7AQ9UPZ6 1657 aa6.27□□□□□ -1.41
ZNF540-204ENST00000586792 CAMTA1Q9Y6Y1 1673 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms