RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 GTPBP6O43824 516 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-203ENST00000586495 PSMA5P28066 241 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 ADAM17P78536 824 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 TAP1Q03518 808 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 AP3B2Q13367 1082 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 MBTPS1Q14703 1052 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 CCDC85BQ15834 202 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-203ENST00000586495 Q6ZUG5 572 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 DBF4BQ8NFT6 615 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 BRF1Q92994 677 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 RAD9AQ99638 391 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 ANO3Q9BYT9 981 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-203ENST00000586495 SMARCAD1Q9H4L7 1026 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 ERAP1Q9NZ08 941 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 PKD2L1Q9P0L9 805 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 TELO2Q9Y4R8 837 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
TRIM47-203ENST00000586495 GSTTP1A0A1W2PQM5 241 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 GJB5O95377 273 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 CPA1P15085 419 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 ADD1P35611 737 aaKnown RBP19.39■□□□□ 0.69
TRIM47-203ENST00000586495 APOBRQ0VD83 1088 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 TCTN1Q2MV58 587 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 LMBR1Q8WVP7 490 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 ARNTL2Q8WYA1 636 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 SEPT8Q92599 483 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 GLG1Q92896 1179 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 TNPO1Q92973 898 aaKnown RBP19.39■□□□□ 0.69
TRIM47-203ENST00000586495 CERS4Q9HA82 394 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 JPH1Q9HDC5 661 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-203ENST00000586495 KCNH7Q9NS40 1196 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 THEGQ9P2T0 379 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 SLC9A2Q9UBY0 812 aa19.39■□□□□ 0.69
TRIM47-203ENST00000586495 AMHP03971 560 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 POU3F3P20264 500 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-203ENST00000586495 PFKFB3Q16875 520 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-203ENST00000586495 CEP55Q53EZ4 464 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 PLEKHG4Q58EX7 1191 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 TJAP1Q5JTD0 557 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 TAF2Q6P1X5 1199 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 FBXL16Q8N461 479 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 ATXN2LQ8WWM7 1075 aaKnown RBP19.38■□□□□ 0.69
TRIM47-203ENST00000586495 KAT6AQ92794 2004 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 SDF4Q9BRK5 362 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 AZI2Q9H6S1 392 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 UNC80Q8N2C7 3258 aa19.38■□□□□ 0.69
TRIM47-203ENST00000586495 NFASCO94856 1347 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 RFXAPO00287 272 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 EPB41L2O43491 1005 aaKnown RBP19.37■□□□□ 0.69
TRIM47-203ENST00000586495 NEFLP07196 543 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 CTSHP09668 335 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 SCG2P13521 617 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 RPS6KB1P23443 525 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 MARK3P27448 753 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 ZNF76P36508 570 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 SREBF1P36956 1147 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 CLK2P49760 499 aaKnown RBP19.37■□□□□ 0.69
TRIM47-203ENST00000586495 AKAP17AQ02040 695 aaKnown RBP19.37■□□□□ 0.69
TRIM47-203ENST00000586495 PPFIA1Q13136 1202 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 MCTP2Q6DN12 878 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-203ENST00000586495 RPAINQ86UA6 219 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 RSPH3Q86UC2 560 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 MICALL1Q8N3F8 863 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 CCDC12Q8WUD4 166 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-203ENST00000586495 PGBD1Q96JS3 809 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 PRDM6Q9NQX0 595 aa19.37■□□□□ 0.69
TRIM47-203ENST00000586495 EYSQ5T1H1 3165 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 ARHGEF15O94989 841 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 FAM26DQ5JW98 314 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 MYOCDQ8IZQ8 938 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 APBB2Q92870 758 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 AGXT2Q9BYV1 514 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 C6orf50Q9HD87 102 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 INSL6Q9Y581 213 aa19.36■□□□□ 0.69
TRIM47-203ENST00000586495 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 LCHNA4D1U4 455 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 RRN3P2A6NIE6 340 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 MEIS1O00470 390 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 PRPF3O43395 683 aaKnown RBP19.35■□□□□ 0.69
TRIM47-203ENST00000586495 RPLP2P05387 115 aaKnown RBP19.35■□□□□ 0.69
TRIM47-203ENST00000586495 ARP10275 920 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 GRIK4Q16099 956 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 FAM117BQ6P1L5 589 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRIM47-203ENST00000586495 NIPA1Q7RTP0 329 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 CYP2W1Q8TAV3 490 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 TMEM260Q9NX78 707 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 TUBE1Q9UJT0 475 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 MTCH2Q9Y6C9 303 aa19.35■□□□□ 0.69
TRIM47-203ENST00000586495 NID2Q14112 1375 aa19.34■□□□□ 0.69
TRIM47-203ENST00000586495 PTPRSQ13332 1948 aa19.34■□□□□ 0.69
TRIM47-203ENST00000586495 CHD9Q3L8U1 2897 aa19.34■□□□□ 0.69
TRIM47-203ENST00000586495 EPOPA6NHQ4 379 aa19.34■□□□□ 0.69
TRIM47-203ENST00000586495 GNA11P29992 359 aa19.34■□□□□ 0.69
TRIM47-203ENST00000586495 MRPS5P82675 430 aaKnown RBP19.34■□□□□ 0.69
TRIM47-203ENST00000586495 MKRN4PQ13434 485 aaPredicted RBP19.34■□□□□ 0.69
TRIM47-203ENST00000586495 JAKMIP3Q5VZ66 844 aa19.34■□□□□ 0.69
TRIM47-203ENST00000586495 TGS1Q96RS0 853 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms