RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 CCL23P55773 120 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 TMEM240Q5SV17 173 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 RASIP1Q5U651 963 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 MOXD1Q6UVY6 613 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 KRT25Q7Z3Z0 450 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SERINC5Q86VE9 423 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 HERVK_113Q902F9 699 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.83□□□□□ -0.521e-8■■■□□ 17.6
SMARCA4-209ENST00000586122 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 BCAS3Q9H6U6 928 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 TBC1D22BQ9NU19 505 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 NRCAMQ92823 1304 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 IPO5O00410 1097 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 ARP10275 920 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 SP4Q02446 784 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 ME3Q16798 604 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 ZNF365Q70YC5 407 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 LRRC8DQ7L1W4 858 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 C16orf59Q7L2K0 433 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 CYP2W1Q8TAV3 490 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 GLG1Q92896 1179 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 ATP6V0A1Q93050 837 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 CTAGE1Q96RT6 745 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 PKD2L1Q9P0L9 805 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 ORC3Q9UBD5 711 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 LIMCH1Q9UPQ0 1083 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
SMARCA4-209ENST00000586122 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 M0R2N6 131 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 PPFIA3O75145 1194 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 BAIAP3O94812 1187 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 ATG7O95352 703 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 ACTR2P61160 394 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 KRT76Q01546 638 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 PRR16Q569H4 304 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 FAM160B1Q5W0V3 765 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 TAF2Q6P1X5 1199 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 PLPPR4Q7Z2D5 763 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 RASGRP4Q8TDF6 673 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 DHX38Q92620 1227 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 SCLYQ96I15 445 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 PHF20Q9BVI0 1012 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 RNPEPQ9H4A4 650 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
SMARCA4-209ENST00000586122 MYO9BQ13459 2157 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 CYP3A7-CYP3A51PA0A087WV96 503 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 CCDC194A0A1B0GVG4 234 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 EFCAB14O75071 495 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 CTDNEP1O95476 244 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 ACRP10323 421 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 CKBP12277 381 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 GCFC2P16383 781 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 CYP3A7P24462 503 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 STAT5BP51692 787 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 RABEP1Q15276 862 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 NPY5RQ15761 445 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 TRIM71Q2Q1W2 868 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 Q4G0T1 1027 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 ZNF697Q5TEC3 545 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 MIS18BP1Q6P0N0 1132 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 TBCKQ8TEA7 893 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 LMBR1Q8WVP7 490 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 RIT2Q99578 217 aa11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-209ENST00000586122 IGKV6D-21A0A0A0MT36 114 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 DHX15O43143 795 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 CXCL10P02778 98 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 ADAM17P78536 824 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 TRIM29Q14134 588 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 RAB30Q15771 203 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 RDM1Q8NG50 284 aa11.79□□□□□ -0.52
SMARCA4-209ENST00000586122 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms