RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
LIG3-206ENST00000586058 DNM3Q9UQ16 869 aa6.92□□□□□ -1.3
LIG3-206ENST00000586058 IGLV3-22A0A075B6J6 115 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 BICDL2A1A5D9 508 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 ASB14A6NK59 587 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 PP2D1A8MPX8 630 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 WDR64B1ANS9 1081 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 DDX39AO00148 427 aaKnown RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 PSMA7O14818 248 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 RPN1P04843 607 aaKnown RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 PTMAP06454 111 aaKnown RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 TPM2P07951 284 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 NR3C2P08235 984 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 IDEP14735 1019 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 RPA1P27694 616 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 CDC25AP30304 524 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 MAPK4P31152 587 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 MYL5Q02045 173 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 DHX8Q14562 1220 aaKnown RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 TAF1CQ15572 869 aaPredicted RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 E2F4Q16254 413 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 FAM110CQ1W6H9 321 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 PDXDC2PQ6P474 469 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 STXBP4Q6ZWJ1 553 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 USP49Q70CQ1 688 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 RASAL3Q86YV0 1011 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 CCDC65Q8IXS2 484 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 SMAP1Q8IYB5 467 aaPredicted RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 AOPEPQ8N6M6 819 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 RDM1Q8NG50 284 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 RAD54LQ92698 747 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 HAS1Q92839 578 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 ATP6V0A1Q93050 837 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 PLIN2Q99541 437 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 FUCA2Q9BTY2 467 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 MOV10L1Q9BXT6 1211 aaKnown RBP6.91□□□□□ -1.3
LIG3-206ENST00000586058 RBSNQ9H1K0 784 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 KCNH7Q9NS40 1196 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 PKD2L1Q9P0L9 805 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 BTBD7Q9P203 1132 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 TUBE1Q9UJT0 475 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 KIAA1024Q9UPX6 916 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 RIPK3Q9Y572 518 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 PCDHA5Q9Y5H7 936 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 UBIAD1Q9Y5Z9 338 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 SIP14410 1827 aa6.91□□□□□ -1.3
LIG3-206ENST00000586058 C2orf72A6NCS6 295 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 BTBD19C9JJ37 291 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 MEIS1O00470 390 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 CBFA2T2O43439 604 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 STRNO43815 780 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 NRDCO43847 1150 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 EIF3JO75822 258 aaKnown RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 TOMM70O94826 608 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 ALDH1A1P00352 501 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 PSAPP07602 524 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 SLC10A3P09131 477 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 CYP2C8P10632 490 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 CYP4A11Q02928 519 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 DPYDQ12882 1025 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 PSMD2Q13200 908 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 GRM1Q13255 1194 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 GRB10Q13322 594 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 KCNB1Q14721 858 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 EPHA7Q15375 998 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 IL17AQ16552 155 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 DPCR1Q3MIW9 517 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 TMEM119Q4V9L6 283 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 HYIQ5T013 277 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 NT5DC1Q5TFE4 455 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 ZNF658Q5TYW1 1059 aaPredicted RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 ZNF746Q6NUN9 644 aaPredicted RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.9□□□□□ -1.3
LIG3-206ENST00000586058 GAS2L3Q86XJ1 694 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 ANKRD13CQ8N6S4 541 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 TBC1D5Q92609 795 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 ERCC4Q92889 916 aaPredicted RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 HHIPL1Q96JK4 782 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 NACC1Q96RE7 527 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 TSG101Q99816 390 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 EIF2AK1Q9BQI3 630 aaKnown RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 POLR3CQ9BUI4 534 aaPredicted RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 TRIM5Q9C035 493 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 ZFYVE28Q9HCC9 887 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 AGO4Q9HCK5 861 aaKnown RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 JPH1Q9HDC5 661 aaPredicted RBP6.9□□□□□ -1.3
LIG3-206ENST00000586058 KBTBD4Q9NVX7 518 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 KCND2Q9NZV8 630 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 COL20A1Q9P218 1284 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 MAN1B1Q9UKM7 699 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 TLL2Q9Y6L7 1015 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 NFASCO94856 1347 aa6.9□□□□□ -1.3
LIG3-206ENST00000586058 FRMPD3Q5JV73 1810 aa6.9□□□□□ -1.31
LIG3-206ENST00000586058 A0A087X0B3 334 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 PVALEFA0A1B0GWK0 134 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 ARHGEF35A5YM69 484 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 NOP56O00567 594 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms