RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 BMS1Q14692 1282 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 FBXO38Q6PIJ6 1188 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 LRRN4CLQ8ND94 238 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 HAS1Q92839 578 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 REEP2Q9BRK0 252 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 DEFB129Q9H1M3 183 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 CETN1Q12798 172 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 CEP55Q53EZ4 464 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 ANGEL2Q5VTE6 544 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 GADL1Q6ZQY3 521 aa13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-208ENST00000585799 TMEM110-MUSTN1A8MSY1 372 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 KLRC4O43908 158 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 ZMYND10O75800 440 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 CAP2P40123 477 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 TXLNBQ8N3L3 684 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 RUFY1Q96T51 708 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 CENPHQ9H3R5 247 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.22
SMARCA4-208ENST00000585799 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 ERVK-24P63145 666 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 LRRC63Q05C16 580 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 ECM1Q16610 540 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 ANKRD35Q8N283 1001 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 FAM20AQ96MK3 541 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 MYBP10242 640 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 ZNF710Q8N1W2 664 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 SPATA20Q8TB22 786 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 GOLGA8IPA6NC78 632 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 GOLGA8JA6NMD2 632 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 RNF225M0QZC1 329 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 NFIBO00712 420 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 PLEKP08567 350 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 ARP10275 920 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 SSR1P43307 286 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 EXOC3L4Q17RC7 722 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 KRT222Q8N1A0 295 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 PHLPP2Q6ZVD8 1323 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
SMARCA4-208ENST00000585799 MEIS2O14770 477 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 CYP11B2P19099 503 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 APBA1Q02410 837 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 RNF207Q6ZRF8 634 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 NACC1Q96RE7 527 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 HAUS4Q9H6D7 363 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 ADAMTS1Q9UHI8 967 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 HACL1Q9UJ83 578 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 MYO6Q9UM54 1294 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 MOCS3O95396 460 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 ABCB4P21439 1286 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 PSMD2Q13200 908 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 SNRNP48Q6IEG0 339 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 LXNQ9BS40 222 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 WDR11Q9BZH6 1224 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 RNF146Q9NTX7 359 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 TMX2Q9Y320 296 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 FAM186BQ8IYM0 893 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 LARSQ9P2J5 1176 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 CDC23Q9UJX2 597 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
SMARCA4-208ENST00000585799 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 LRRN2O75325 713 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 PRELPP51888 382 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 NCAPG2Q86XI2 1143 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 ATG4CQ96DT6 458 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 MLXIPQ9HAP2 919 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 SNHG28P0DPA3 235 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 ACTN1P12814 892 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 KIF11P52732 1056 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 PPARDQ03181 441 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 MTMR1Q13613 665 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 KIAA0753Q2KHM9 967 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 U2AF1L4Q8WU68 220 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 GMCL1Q96IK5 515 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 AS3MTQ9HBK9 375 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 EML1O00423 815 aa13.68□□□□□ -0.22
SMARCA4-208ENST00000585799 HLTFQ14527 1009 aaKnown RBP eCLIP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms