RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 CCDC148Q8NFR7 591 aa26.5■■□□□ 1.83
LSM7-203ENST00000585409 WASF1Q92558 559 aa26.5■■□□□ 1.83
LSM7-203ENST00000585409 RMDN3Q96TC7 470 aa26.5■■□□□ 1.83
LSM7-203ENST00000585409 PSTPIP2Q9H939 334 aa26.5■■□□□ 1.83
LSM7-203ENST00000585409 BARHL2Q9NY43 387 aa26.5■■□□□ 1.83
LSM7-203ENST00000585409 DDX41Q9UJV9 622 aaKnown RBP26.5■■□□□ 1.83
LSM7-203ENST00000585409 STK36Q9NRP7 1315 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 HSD17B4P51659 736 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 WWC2Q6AWC2 1192 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 FAM177A1Q8N128 213 aaPredicted RBP26.49■■□□□ 1.83
LSM7-203ENST00000585409 SMARCC2Q8TAQ2 1214 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 FAM122AQ96E09 287 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 EPHX3Q9H6B9 360 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 HDAC6Q9UBN7 1215 aa26.49■■□□□ 1.83
LSM7-203ENST00000585409 ABHD14A-ACY1A0A1B0GW23 586 aa26.48■■□□□ 1.83
LSM7-203ENST00000585409 HAS3O00219 553 aa26.48■■□□□ 1.83
LSM7-203ENST00000585409 XBP1P17861 261 aa26.48■■□□□ 1.83
LSM7-203ENST00000585409 TRIM71Q2Q1W2 868 aaKnown RBP26.48■■□□□ 1.83
LSM7-203ENST00000585409 TRAF7Q6Q0C0 670 aa26.48■■□□□ 1.83
LSM7-203ENST00000585409 GDPD5Q8WTR4 605 aa26.48■■□□□ 1.83
LSM7-203ENST00000585409 GPKOWQ92917 476 aaPredicted RBP eCLIP26.48■■□□□ 1.83
LSM7-203ENST00000585409 ZBED2Q9BTP6 218 aa26.48■■□□□ 1.83
LSM7-203ENST00000585409 EIF3JO75822 258 aaKnown RBP26.47■■□□□ 1.83
LSM7-203ENST00000585409 GJB5O95377 273 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 F2P00734 622 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 PSEN2P49810 448 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 C7orf31Q8N865 590 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 PPTC7Q8NI37 304 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 RAD9AQ99638 391 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 KATNAL1Q9BW62 490 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 EHMT1Q9H9B1 1298 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 SH3GLB2Q9NR46 395 aa26.47■■□□□ 1.83
LSM7-203ENST00000585409 MICAL3Q7RTP6 2002 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 STXBP3O00186 592 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 PIK3CDO00329 1044 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 GNA11P29992 359 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 ADCY7P51828 1080 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 ERVK-21P61565 698 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 PTK7Q13308 1070 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 ARHGEF16Q5VV41 709 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 MCTP2Q6DN12 878 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 NECAB1Q8N987 351 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 LRFN3Q9BTN0 628 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 SUGCTQ9HAC7 445 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 C6orf50Q9HD87 102 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 PXMP2Q9NR77 195 aa26.46■■□□□ 1.83
LSM7-203ENST00000585409 ESYT2A0FGR8 921 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 OPLAHO14841 1288 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 EFCAB14O75071 495 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 NR3C2P08235 984 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 HOXD8P13378 290 aaPredicted RBP26.45■■□□□ 1.82
LSM7-203ENST00000585409 EIF2AK2P19525 551 aaKnown RBP26.45■■□□□ 1.82
LSM7-203ENST00000585409 LAMC2Q13753 1193 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 MFSD10Q14728 455 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 BICD2Q8TD16 824 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 WNT8BQ93098 351 aa26.45■■□□□ 1.82
LSM7-203ENST00000585409 LLPHQ9BRT6 129 aaKnown RBP26.45■■□□□ 1.82
LSM7-203ENST00000585409 ARIH1Q9Y4X5 557 aaPredicted RBP26.45■■□□□ 1.82
LSM7-203ENST00000585409 SMCO2A6NFE2 343 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 LARGE1O95461 756 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 PKN1Q16512 942 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 KIAA0753Q2KHM9 967 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 TGS1Q96RS0 853 aaKnown RBP26.44■■□□□ 1.82
LSM7-203ENST00000585409 ALG1Q9BT22 464 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 RIC8AQ9NPQ8 531 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 MRVI1Q9Y6F6 885 aa26.44■■□□□ 1.82
LSM7-203ENST00000585409 LINC01553A4QN01 128 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 SPDYE3A6NKU9 549 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 ZNF286BP0CG31 522 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 HOXA13P31271 388 aaPredicted RBP26.43■■□□□ 1.82
LSM7-203ENST00000585409 IKBKEQ14164 716 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 MBTPS1Q14703 1052 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 ZNF618Q5T7W0 954 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 FCHSD1Q86WN1 690 aa26.43■■□□□ 1.82
LSM7-203ENST00000585409 KHSRPQ92945 711 aaKnown RBP eCLIP26.43■■□□□ 1.82
LSM7-203ENST00000585409 ORC3Q9UBD5 711 aaPredicted RBP26.43■■□□□ 1.82
LSM7-203ENST00000585409 RGS20O76081 388 aa26.42■■□□□ 1.82
LSM7-203ENST00000585409 FOSP01100 380 aaPredicted RBP26.42■■□□□ 1.82
LSM7-203ENST00000585409 HMGN5P82970 282 aaKnown RBP26.42■■□□□ 1.82
LSM7-203ENST00000585409 MKRN4PQ13434 485 aaPredicted RBP26.42■■□□□ 1.82
LSM7-203ENST00000585409 CCDC83Q8IWF9 413 aa26.42■■□□□ 1.82
LSM7-203ENST00000585409 DHX37Q8IY37 1157 aaKnown RBP26.42■■□□□ 1.82
LSM7-203ENST00000585409 ZNF200P98182 395 aaPredicted RBP26.41■■□□□ 1.82
LSM7-203ENST00000585409 HIC1Q14526 733 aa26.41■■□□□ 1.82
LSM7-203ENST00000585409 ZMYND12Q9H0C1 365 aa26.41■■□□□ 1.82
LSM7-203ENST00000585409 MTUS1Q9ULD2 1270 aa26.41■■□□□ 1.82
LSM7-203ENST00000585409 KIF3AQ9Y496 699 aa26.41■■□□□ 1.82
LSM7-203ENST00000585409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.4■■□□□ 1.82
LSM7-203ENST00000585409 RBAK-RBAKDNI3L0D1 243 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 PPFIA3O75145 1194 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 PPFIA4O75335 1185 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 NLRP5P59047 1200 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 AP3B2Q13367 1082 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 TMEM31Q5JXX7 168 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 MYSM1Q5VVJ2 828 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 GALNT17Q6IS24 598 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 USP17L6PQ6QN14 398 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 NSUN7Q8NE18 718 aaKnown RBP26.4■■□□□ 1.82
LSM7-203ENST00000585409 PDCD2LQ9BRP1 358 aa26.4■■□□□ 1.82
LSM7-203ENST00000585409 C11orf16Q9NQ32 467 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms