RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MFAP3LO75121 409 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RIOX2Q8IUF8 465 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CYP2W1Q8TAV3 490 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 LENG9Q96B70 501 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PURBQ96QR8 312 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CARD6Q9BX69 1037 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TXNRD2Q9NNW7 524 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 KCNMB3Q9NPA1 279 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 KIF5CO60282 957 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CYP2C8P10632 490 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RBL2Q08999 1139 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 KCNB1Q14721 858 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CHST13Q8NET6 341 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 AK8Q96MA6 479 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CUEDC2Q9H467 287 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MAGEF1Q9HAY2 307 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PNMA3Q9UL41 463 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 FHOD1Q9Y613 1164 aa16.67■□□□□ 0.26
CDK5RAP3-236ENST00000584991 IGLV3-22A0A075B6J6 115 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PDHXO00330 501 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 FANCGO15287 622 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TEX33O43247 280 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TUBBP07437 444 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PAK1Q13153 545 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 NCAPG2Q86XI2 1143 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CEP112Q8N8E3 955 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CYP39A1Q9NYL5 469 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RABGAP1Q9Y3P9 1069 aa16.66■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PNMA6AP0CW24 399 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 EIF2AK2P19525 551 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 UBA7P41226 1012 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PPP1R2P41236 205 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 Q3C1V9 767 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SAPCD2Q86UD0 394 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ETNPPLQ8TBG4 499 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 GOLGA1Q92805 767 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 WDR24Q96S15 920 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MOV10L1Q9BXT6 1211 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MSH4O15457 936 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CEP55Q53EZ4 464 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RRAGBQ5VZM2 374 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 KLHL10Q6JEL2 608 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RASAL3Q86YV0 1011 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 NOC3LQ8WTT2 800 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RAB34Q9BZG1 259 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CCSER1Q9C0I3 900 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
CDK5RAP3-236ENST00000584991 LCTP09848 1927 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 FRMPD4Q14CM0 1322 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 POTEMA6NI47 508 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TBX3O15119 743 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PDIA5Q14554 519 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PGM5Q15124 567 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ARHGEF16Q5VV41 709 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CYP26C1Q6V0L0 522 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CABP7Q86V35 215 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 RASSF8Q8NHQ8 419 aa16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SMCR8Q8TEV9 937 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-236ENST00000584991 A0A1W2PQC6 194 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 N4BP3O15049 544 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 RPN1P04843 607 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 ERCC3P19447 782 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 STIM1Q13586 685 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 BRD3Q15059 726 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 KRT31Q15323 416 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 TCP11X2Q5H9J9 407 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PCNX4Q63HM2 1172 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 LRRN4CLQ8ND94 238 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PTPN18Q99952 460 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MXRA8Q9BRK3 442 aa16.63■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PDCD2LQ9BRP1 358 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms