RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 F5H6K3 240 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 SNHG28P0DPA3 235 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 CPA1P15085 419 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 MAPK1P28482 360 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 CD97P48960 835 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 AFF1P51825 1210 aaKnown RBP6.61□□□□□ -1.35
CDH8-213ENST00000584966 CAP1Q01518 475 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 KLRC3Q07444 240 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 SREBF2Q12772 1141 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 CATSPERGQ6ZRH7 1159 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 FASTKD5Q7L8L6 764 aaKnown RBP6.61□□□□□ -1.35
CDH8-213ENST00000584966 RASGRP2Q7LDG7 609 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 GIPC2Q8TF65 315 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 NEK1Q96PY6 1258 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 TSPAN10Q9H1Z9 355 aaPredicted RBP6.61□□□□□ -1.35
CDH8-213ENST00000584966 LY9Q9HBG7 655 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 ZCCHC17Q9NP64 241 aaKnown RBP6.61□□□□□ -1.35
CDH8-213ENST00000584966 SYNPO2Q9UMS6 1093 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 AGTPBP1Q9UPW5 1226 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 SLC45A1Q9Y2W3 748 aa6.61□□□□□ -1.35
CDH8-213ENST00000584966 TNKSO95271 1327 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 WDR19Q8NEZ3 1342 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 PDHXO00330 501 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 EML1O00423 815 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 SH2B2O14492 632 aaPredicted RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 CA12O43570 354 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 CNMDO75829 334 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 NDUFB10O96000 172 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 TOP1P11387 765 aaKnown RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 VCAM1P19320 739 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 FSTP19883 344 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 MCM5P33992 734 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 USP14P54578 494 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 MAP2K1Q02750 393 aaPredicted RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 CRHR2Q13324 411 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 NAA30Q147X3 362 aaPredicted RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 ZYXQ15942 572 aaKnown RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 C17orf99Q6UX52 265 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 GADL1Q6ZQY3 521 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 DHX32Q7L7V1 743 aaKnown RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 SPICE1Q8N0Z3 855 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 LRRC47Q8N1G4 583 aaKnown RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 FBXL16Q8N461 479 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 GMCL1P1Q8NEA9 526 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 LPAR1Q92633 364 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 CEP63Q96MT8 703 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 P2RX7Q99572 595 aaKnown RBP6.6□□□□□ -1.35
CDH8-213ENST00000584966 MTA3Q9BTC8 594 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 KRTAP4-2Q9BYR5 136 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 LRRC2Q9BYS8 371 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 AGXT2Q9BYV1 514 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 TM6SF1Q9BZW5 370 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 BRD7Q9NPI1 651 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 TOMM22Q9NS69 142 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 SAGE1Q9NXZ1 904 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 ADAMTS5Q9UNA0 930 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 STX8Q9UNK0 236 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 MCM3APO60318 1980 aa6.6□□□□□ -1.35
CDH8-213ENST00000584966 WDR46O15213 610 aaKnown RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 FOXN1O15353 648 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 PRC1O43663 620 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TLR2O60603 784 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 PEX10O60683 326 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TRPA1O75762 1119 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TBC1D8O95759 1140 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 CYP2C8P10632 490 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 PDHBP11177 359 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 ZKSCAN1P17029 563 aaPredicted RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 RPS6KB1P23443 525 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 MCCP23508 829 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 LIFRP42702 1097 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 ANAPC15P60006 121 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 ATP2B2Q01814 1243 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TROAPQ12815 778 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TRDNQ13061 729 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 KRT32Q14532 448 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 SLC35G1Q2M3R5 365 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 CCDC178Q5BJE1 867 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 FAM83BQ5T0W9 1011 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 SLFN13Q68D06 897 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 PSAPL1Q6NUJ1 521 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 LBX2Q6XYB7 198 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 IQCA1Q86XH1 822 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 STAG2Q8N3U4 1231 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 REPS2Q8NFH8 660 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TCEANC2Q96MN5 208 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 JAKMIP1Q96N16 626 aaKnown RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 NUP88Q99567 741 aaPredicted RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 ASCC2Q9H1I8 757 aaPredicted RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 ALDH8A1Q9H2A2 487 aaPredicted RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 RPAP3Q9H6T3 665 aaPredicted RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 FBXO28Q9NVF7 368 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 TMOD4Q9NZQ9 345 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 SCHIP1Q9P0W5 487 aaPredicted RBP6.59□□□□□ -1.35
CDH8-213ENST00000584966 RBPJLQ9UBG7 517 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 BRPF3Q9ULD4 1205 aa6.59□□□□□ -1.35
CDH8-213ENST00000584966 RBBP6Q7Z6E9 1792 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms