RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 UIMC1Q96RL1 719 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 SLC26A6Q9BXS9 759 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 OSBPL7Q9BZF2 842 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 PRDM12Q9H4Q4 367 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 KCNH7Q9NS40 1196 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 CHD7Q9P2D1 2997 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 KAT6AQ92794 2004 aa20.59■□□□□ 0.89
SRSF1-208ENST00000584773 PRPF3O43395 683 aaKnown RBP20.59■□□□□ 0.89
SRSF1-208ENST00000584773 THPOP40225 353 aa20.59■□□□□ 0.89
SRSF1-208ENST00000584773 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
SRSF1-208ENST00000584773 MAFAQ8NHW3 353 aaPredicted RBP20.59■□□□□ 0.89
SRSF1-208ENST00000584773 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
SRSF1-208ENST00000584773 EPB41L2O43491 1005 aaKnown RBP20.58■□□□□ 0.89
SRSF1-208ENST00000584773 ARHGEF15O94989 841 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 FOSP01100 380 aaPredicted RBP20.58■□□□□ 0.89
SRSF1-208ENST00000584773 CXCL10P02778 98 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 CTSHP09668 335 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 SREBF1P36956 1147 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 EVCP57679 992 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 ARHGAP4P98171 946 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 ITGB3BPQ13352 177 aaPredicted RBP20.58■□□□□ 0.89
SRSF1-208ENST00000584773 AP3B2Q13367 1082 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 LMBR1Q8WVP7 490 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 SEPT1Q8WYJ6 367 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 PCYT2Q99447 389 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 ZNF215Q9UL58 517 aaPredicted RBP20.58■□□□□ 0.89
SRSF1-208ENST00000584773 CYP46A1Q9Y6A2 500 aa20.58■□□□□ 0.89
SRSF1-208ENST00000584773 DTNBO60941 627 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 DEFB103AP81534 67 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 STK3Q13188 491 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 CEP55Q53EZ4 464 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 ZBTB10Q96DT7 871 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 ZMYND12Q9H0C1 365 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 AGO4Q9HCK5 861 aaKnown RBP20.57■□□□□ 0.88
SRSF1-208ENST00000584773 JPH1Q9HDC5 661 aaPredicted RBP20.57■□□□□ 0.88
SRSF1-208ENST00000584773 VPS54Q9P1Q0 977 aa20.57■□□□□ 0.88
SRSF1-208ENST00000584773 FAM86B1E9PN63 330 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 FAM86B2P0C5J1 330 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 IFNAR1P17181 557 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 WDR5P61964 334 aaKnown RBP20.56■□□□□ 0.88
SRSF1-208ENST00000584773 ADAM17P78536 824 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 CNKSR3Q6P9H4 555 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 RUFY4Q6ZNE9 571 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 RNF26Q9BY78 433 aaPredicted RBP20.56■□□□□ 0.88
SRSF1-208ENST00000584773 SLC28A3Q9HAS3 691 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 SLC9A2Q9UBY0 812 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 PCDHA11Q9Y5I1 949 aa20.56■□□□□ 0.88
SRSF1-208ENST00000584773 ESYT2A0FGR8 921 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 RSPH10B2B2RC85 870 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 DDX39AO00148 427 aaKnown RBP20.55■□□□□ 0.88
SRSF1-208ENST00000584773 CA3P07451 260 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 RSPH10BP0C881 870 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 ZNF76P36508 570 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
SRSF1-208ENST00000584773 ADGRE1Q14246 886 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 PPP2R2DQ66LE6 453 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 SPRED2Q7Z698 418 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 HERC6Q8IVU3 1022 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 USP38Q8NB14 1042 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 GLG1Q92896 1179 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 SLC9A7Q96T83 725 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 TM6SF1Q9BZW5 370 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 PDRG1Q9NUG6 133 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 SIP14410 1827 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 MICAL3Q7RTP6 2002 aa20.55■□□□□ 0.88
SRSF1-208ENST00000584773 MEIS1O00470 390 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 MAFGO15525 162 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 ACTR2P61160 394 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 REXO1Q8N1G1 1221 aaKnown RBP20.54■□□□□ 0.88
SRSF1-208ENST00000584773 CRYGNQ8WXF5 182 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 SDF4Q9BRK5 362 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 GLT8D2Q9H1C3 349 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 CERS4Q9HA82 394 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 C6orf50Q9HD87 102 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 A0A0C4DFX4 3053 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 NFASCO94856 1347 aa20.54■□□□□ 0.88
SRSF1-208ENST00000584773 IGLV3-22A0A075B6J6 115 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 LGR5O75473 907 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 CCNE2O96020 404 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 KCNJ6P48051 423 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 IGBP1P78318 339 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 PPFIA1Q13136 1202 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 PLA2G4DQ86XP0 818 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 DBF4BQ8NFT6 615 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 AIFM3Q96NN9 605 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 ERAP1Q9NZ08 941 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 EMSYQ7Z589 1322 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 LCHNA4D1U4 455 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 RFXAPO00287 272 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 EDIL3O43854 480 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 PARNO95453 639 aaKnown RBP20.53■□□□□ 0.88
SRSF1-208ENST00000584773 GRIK4Q16099 956 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.53■□□□□ 0.884e-10■■■■■ 56.8
SRSF1-208ENST00000584773 TEX2Q8IWB9 1127 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.53■□□□□ 0.88
SRSF1-208ENST00000584773 PHOSPHO2Q8TCD6 241 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 CCDC12Q8WUD4 166 aaPredicted RBP20.53■□□□□ 0.88
SRSF1-208ENST00000584773 PPM1EQ8WY54 764 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms