RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 HECW2Q9P2P5 1572 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 EFCAB6Q5THR3 1501 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 F8W031 263 aaPredicted RBP11.17□□□□□ -0.62
CDH8-211ENST00000584337 AGTP01019 485 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 CCDC166P0CW27 439 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 RARAP10276 462 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 P3H1Q32P28 736 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 PEX26Q7Z412 305 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDH8-211ENST00000584337 STAG2Q8N3U4 1231 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 LRRC37BQ96QE4 947 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 YIPF2Q9BWQ6 316 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 PHF24Q9UPV7 400 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 GDAQ9Y2T3 454 aa11.17□□□□□ -0.62
CDH8-211ENST00000584337 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
CDH8-211ENST00000584337 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 CNOT6LQ96LI5 555 aaKnown RBP11.16□□□□□ -0.62
CDH8-211ENST00000584337 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 PDLIM1O00151 329 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 TXNDC9O14530 226 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 DEXIO95424 95 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 BAG2O95816 211 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 CD151P48509 253 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 PLTPP55058 493 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 PTPROQ16827 1216 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 APTXQ7Z2E3 356 aaKnown RBP11.16□□□□□ -0.62
CDH8-211ENST00000584337 NANOGNBQ7Z5D8 188 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 TLR10Q9BXR5 811 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 PITPNM3Q9BZ71 974 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 SH3GLB1Q9Y371 365 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 MARCH6O60337 910 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 CIB2O75838 187 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 PENKP01210 267 aaPredicted RBP11.16□□□□□ -0.62
CDH8-211ENST00000584337 ALADP13716 330 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 DPYDQ12882 1025 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 NR1H4Q96RI1 486 aaPredicted RBP11.16□□□□□ -0.62
CDH8-211ENST00000584337 SMC6Q96SB8 1091 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 CUEDC2Q9H467 287 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 ANGPTL2Q9UKU9 493 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 SLC4A7Q9Y6M7 1214 aa11.16□□□□□ -0.62
CDH8-211ENST00000584337 ABCC3O15438 1527 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 RANBP6O60518 1105 aaKnown RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 MBD4O95243 580 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 SRGNP10124 158 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 GNAT2P19087 354 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 KRT2P35908 639 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 MLH1P40692 756 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 WASHC2DQ5SRD0 308 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 SFMBT2Q5VUG0 894 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 SNX30Q5VWJ9 437 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 WDR59Q6PJI9 974 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 EIF1ADQ8N9N8 165 aaKnown RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 CCDC77Q9BR77 488 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 NLRC4Q9NPP4 1024 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 SPATA7Q9P0W8 599 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 PACSIN2Q9UNF0 486 aaPredicted RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 MAP3K19Q56UN5 1328 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 DCTN3O75935 186 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 MMP1P03956 469 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 SHBGP04278 402 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 PRCPP42785 496 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 PMS2P54278 862 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 BNIP1Q12981 228 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 NR5A1Q13285 461 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 PPP2R5EQ16537 467 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 MEA1Q16626 185 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 ZNF572Q7Z3I7 529 aaPredicted RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 PIGWQ7Z7B1 504 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 GFM2Q969S9 779 aaKnown RBP11.15□□□□□ -0.62
CDH8-211ENST00000584337 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 TSG101Q99816 390 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 MLXIPLQ9NP71 852 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 TRIM33Q9UPN9 1127 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 ABCC12Q96J65 1359 aa11.15□□□□□ -0.62
CDH8-211ENST00000584337 GPR75-ASB3A0A0A6YYF3 556 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 GSTTP1A0A1W2PQM5 241 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 FGAP02671 866 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 ZCWPW2Q504Y3 356 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 GRAMD1AQ96CP6 724 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 ERP27Q96DN0 273 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 MED15Q96RN5 788 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 ASB3Q9Y575 518 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 PASKQ96RG2 1323 aa11.15□□□□□ -0.63
CDH8-211ENST00000584337 ZNF609O15014 1411 aa11.14□□□□□ -0.63
CDH8-211ENST00000584337 CRB1P82279 1406 aa11.14□□□□□ -0.63
CDH8-211ENST00000584337 B4E1Z4 1266 aa11.14□□□□□ -0.63
CDH8-211ENST00000584337 ADARP55265 1226 aaKnown RBP11.14□□□□□ -0.63
CDH8-211ENST00000584337 ASIC1P78348 528 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms