RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 GSTTP1A0A1W2PQM5 241 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 RSPH10B2B2RC85 870 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 MAFGO15525 162 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CA3P07451 260 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 RSPH10BP0C881 870 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CCT2P78371 535 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CNKSR3Q6P9H4 555 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TRAF7Q6Q0C0 670 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 HERC6Q8IVU3 1022 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PHOSPHO2Q8TCD6 241 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PPM1EQ8WY54 764 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 LARP6Q9BRS8 491 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 NCOA5Q9HCD5 579 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 JPH1Q9HDC5 661 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CYP46A1Q9Y6A2 500 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 GBF1Q92538 1859 aa15.56■□□□□ 0.08
CDK5RAP3-233ENST00000584186 KIF28PB7ZC32 967 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PRPF3O43395 683 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CXCL10P02778 98 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CTSHP09668 335 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ARP10275 920 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 IGFBP4P22692 258 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PDIA3P30101 505 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 HOXC8P31273 242 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 WDR5P61964 334 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 AP3B2Q13367 1082 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 IKBKEQ14164 716 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 MBTPS1Q14703 1052 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TCTN1Q2MV58 587 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CEP55Q53EZ4 464 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TMCO2Q7Z6W1 182 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TEX2Q8IWB9 1127 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 FBXL16Q8N461 479 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 SDF4Q9BRK5 362 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ZBED2Q9BTP6 218 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 AGXT2Q9BYV1 514 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 UPF3BQ9BZI7 483 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CERS4Q9HA82 394 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ZSWIM6Q9HCJ5 1215 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 C6orf50Q9HD87 102 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ERAP1Q9NZ08 941 aa15.55■□□□□ 0.08
CDK5RAP3-233ENST00000584186 EMSYQ7Z589 1322 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 NRCAMQ92823 1304 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 DLL1O00548 723 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ADAMTS3O15072 1205 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 EPB41L2O43491 1005 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TLL1O43897 1013 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 SREBF1P36956 1147 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CLK2P49760 499 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 DEFB103AP81534 67 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PPFIA1Q13136 1202 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TOB2Q14106 344 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PKN1Q16512 942 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 TET1Q8NFU7 2136 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 UIMC1Q96RL1 719 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 SMARCAD1Q9H4L7 1026 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 SLC9A2Q9UBY0 812 aa15.54■□□□□ 0.08
CDK5RAP3-233ENST00000584186 NID2Q14112 1375 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ABHD14A-ACY1A0A1B0GW23 586 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 DDX39AO00148 427 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 LGR5O75473 907 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 IGBP1P78318 339 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ADGRE1Q14246 886 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 FAM117BQ6P1L5 589 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 REXO1Q8N1G1 1221 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 DBF4BQ8NFT6 615 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ZMYND12Q9H0C1 365 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 AZI2Q9H6S1 392 aa15.53■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ESYT2A0FGR8 921 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 MEIS1O00470 390 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 IFNAR1P17181 557 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 GNA11P29992 359 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 EVCP57679 992 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ACTR2P61160 394 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 STK3Q13188 491 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ITGB3BPQ13352 177 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 CCDC85BQ15834 202 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 GRIK4Q16099 956 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 NTRK3Q16288 839 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 ERICH6BQ5W0A0 696 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PLA2G4DQ86XP0 818 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 USP38Q8NB14 1042 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 RASGRP4Q8TDF6 673 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 RNF26Q9BY78 433 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 PDRG1Q9NUG6 133 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 VPS54Q9P1Q0 977 aa15.52■□□□□ 0.08
CDK5RAP3-233ENST00000584186 NFASCO94856 1347 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 FAM86B1E9PN63 330 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 RFXAPO00287 272 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CPLX1O14810 134 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 EFCAB14O75071 495 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CAND2O75155 1236 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 FAM86B2P0C5J1 330 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ADAM17P78536 824 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms