RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PURBQ96QR8 312 aaKnown RBP12.95□□□□□ -0.34
CCDC47-206ENST00000584112 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 IL25Q9H293 177 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
CCDC47-206ENST00000584112 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
CCDC47-206ENST00000584112 PDE4DQ08499 809 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 CWF19L1Q69YN2 538 aaKnown RBP12.94□□□□□ -0.34
CCDC47-206ENST00000584112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.346e-9■■□□□ 13.2
CCDC47-206ENST00000584112 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
CCDC47-206ENST00000584112 TMEM192Q8IY95 271 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 CCDC105Q8IYK2 499 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 FLCNQ8NFG4 579 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 WDR11Q9BZH6 1224 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
CCDC47-206ENST00000584112 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
CCDC47-206ENST00000584112 KAT6AQ92794 2004 aa12.94□□□□□ -0.34
CCDC47-206ENST00000584112 RBM47A0AV96 593 aaKnown RBP12.93□□□□□ -0.34
CCDC47-206ENST00000584112 ERICH2A1L162 156 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 NKRFO15226 690 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC47-206ENST00000584112 GRM6O15303 877 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 SGSM2O43147 1006 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 CYP21A2P08686 494 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 CLCN5P51795 746 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
CCDC47-206ENST00000584112 SEC23AQ15436 765 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
CCDC47-206ENST00000584112 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 FBXO11Q86XK2 927 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 MCF2L2Q86YR7 1114 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
CCDC47-206ENST00000584112 MFSD1Q9H3U5 465 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 MRPL11Q9Y3B7 192 aaKnown RBP12.93□□□□□ -0.34
CCDC47-206ENST00000584112 LOC400499M0QZD8 3231 aa12.93□□□□□ -0.34
CCDC47-206ENST00000584112 SDHBP21912 280 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 EDNRBP24530 442 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 CPT1AP50416 773 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 PTH1RQ03431 593 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 PPP2R5BQ15173 497 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 CNKSR3Q6P9H4 555 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 NCOA7Q8NI08 942 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 SCFD2Q8WU76 684 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 RIN2Q8WYP3 895 aaPredicted RBP12.92□□□□□ -0.34
CCDC47-206ENST00000584112 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
CCDC47-206ENST00000584112 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
CCDC47-206ENST00000584112 KLRF2D3W0D1 207 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 E7EWF7 191 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
CCDC47-206ENST00000584112 HTRA4P83105 476 aaPredicted RBP12.91□□□□□ -0.34
CCDC47-206ENST00000584112 COASYQ13057 564 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 TRAF1Q13077 416 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 LRSAM1Q6UWE0 723 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 OR6J1Q8NGC5 347 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
CCDC47-206ENST00000584112 AMNQ9BXJ7 453 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 ZMIZ1Q9ULJ6 1067 aa12.91□□□□□ -0.34
CCDC47-206ENST00000584112 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 NBNO60934 754 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 WTAPQ15007 396 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 SYTL5Q8TDW5 730 aaPredicted RBP12.9□□□□□ -0.34
CCDC47-206ENST00000584112 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 RTKNQ9BST9 563 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
CCDC47-206ENST00000584112 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.34
CCDC47-206ENST00000584112 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
CCDC47-206ENST00000584112 ITPR1Q14643 2758 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 PALM3A6NDB9 673 aaPredicted RBP12.89□□□□□ -0.35
CCDC47-206ENST00000584112 ZBTB5O15062 677 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 KPNA6O60684 536 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 GLP2RO95838 553 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 PROS1P07225 676 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
CCDC47-206ENST00000584112 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
CCDC47-206ENST00000584112 BFSP2Q13515 415 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 GRM4Q14833 912 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 STXBP2Q15833 593 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 ADGRD2Q7Z7M1 963 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 SAMD3Q8N6K7 520 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
CCDC47-206ENST00000584112 RBM8AQ9Y5S9 174 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms