RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 CD244Q9BZW8 370 aa5.69□□□□□ -1.5
SKA2-210ENST00000584089 SMURF1Q9HCE7 757 aa5.69□□□□□ -1.5
SKA2-210ENST00000584089 TNPO3Q9Y5L0 923 aaKnown RBP5.69□□□□□ -1.5
SKA2-210ENST00000584089 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
SKA2-210ENST00000584089 GJA4P35212 333 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 FLT3P36888 993 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 TMEM177Q53S58 311 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 PLEKHG4Q58EX7 1191 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 SDE2Q6IQ49 451 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 ZCCHC8Q6NZY4 707 aaKnown RBP5.68□□□□□ -1.5
SKA2-210ENST00000584089 HHIPL2Q6UWX4 724 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 OVCH1Q7RTY7 1134 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 SAPCD2Q86UD0 394 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 CISD2Q8N5K1 135 aaKnown RBP5.68□□□□□ -1.5
SKA2-210ENST00000584089 TTLL6Q8N841 843 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 KYQ8NBH2 561 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 ZBTB8AQ96BR9 441 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 PLAAQ9Y263 795 aa5.68□□□□□ -1.5
SKA2-210ENST00000584089 CLASP2O75122 1294 aaKnown RBP5.67□□□□□ -1.5
SKA2-210ENST00000584089 ZSCAN22P10073 491 aaPredicted RBP5.67□□□□□ -1.5
SKA2-210ENST00000584089 HSD3B2P26439 372 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 ITGA1P56199 1179 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 ZNF460Q14592 562 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 C21orf62-AS1Q17RA5 79 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 BTBD8Q5XKL5 378 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
SKA2-210ENST00000584089 LINC01356Q8N9X3 169 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 TMEM209Q96SK2 561 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 SAMD15Q9P1V8 674 aa5.67□□□□□ -1.5
SKA2-210ENST00000584089 SH3D21A4FU49 640 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 FAM90A27PA6NNH2 459 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 ACOT7O00154 380 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 FFAR3O14843 346 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 SMARCA5O60264 1052 aaPredicted RBP5.66□□□□□ -1.5
SKA2-210ENST00000584089 PTPN1P18031 435 aaKnown RBP5.66□□□□□ -1.5
SKA2-210ENST00000584089 DLX2Q07687 328 aaPredicted RBP5.66□□□□□ -1.5
SKA2-210ENST00000584089 ADAM9Q13443 819 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 ARHGAP44Q17R89 818 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 DALRD3Q5D0E6 543 aaKnown RBP5.66□□□□□ -1.5
SKA2-210ENST00000584089 TAF7LQ5H9L4 462 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 PROSER1Q86XN7 944 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 NIM1KQ8IY84 436 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 C2orf69Q8N8R5 385 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 SYT3Q9BQG1 590 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 RIC8BQ9NVN3 520 aa5.66□□□□□ -1.5
SKA2-210ENST00000584089 SLC12A8A0AV02 714 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 M0R2C6 588 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 ENO2P09104 434 aaPredicted RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 JMJD7P0C870 316 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 POU3F2P20265 443 aaPredicted RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 THBS2P35442 1172 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 MECP2P51608 486 aaKnown RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 SMAD4Q13485 552 aaKnown RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 CFAP100Q494V2 611 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 CD276Q5ZPR3 534 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 CDCA2Q69YH5 1023 aaPredicted RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 VASNQ6EMK4 673 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 LCNL1Q6ZST4 164 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 TTLL7Q6ZT98 887 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 OTOP1Q7RTM1 612 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 LRRTM3Q86VH5 581 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 NOSTRINQ8IVI9 506 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 ZNF526Q8TF50 670 aaPredicted RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 MFSD3Q96ES6 412 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 WNK4Q96J92 1243 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 CLIC6Q96NY7 704 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 WRNIP1Q96S55 665 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 SPATA6Q9NWH7 488 aaPredicted RBP5.65□□□□□ -1.5
SKA2-210ENST00000584089 WASF3Q9UPY6 502 aa5.65□□□□□ -1.5
SKA2-210ENST00000584089 KCNK3O14649 394 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 CYP7B1O75881 506 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 GLRX3O76003 335 aaKnown RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 C4BPAP04003 597 aaKnown RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 RPL13P26373 211 aaKnown RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 HERVK_113P62684 666 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 DBPQ10586 325 aaPredicted RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 FZD5Q13467 585 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 PIK3R6Q5UE93 754 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 TMC5Q6UXY8 1006 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 LIPIQ6XZB0 460 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 STK32CQ86UX6 486 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 DHX37Q8IY37 1157 aaKnown RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 DTX3Q8N9I9 347 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 TP53I13Q8NBR0 393 aaPredicted RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 CHST14Q8NCH0 376 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 DDX1Q92499 740 aaKnown RBP5.64□□□□□ -1.51
SKA2-210ENST00000584089 ORAI3Q9BRQ5 295 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 BOCQ9BWV1 1114 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 CABP5Q9NP86 173 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 NTMQ9P121 344 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 RBPJLQ9UBG7 517 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 B3GALT1Q9Y5Z6 326 aa5.64□□□□□ -1.51
SKA2-210ENST00000584089 CBX4O00257 560 aa5.63□□□□□ -1.51
SKA2-210ENST00000584089 TRAF5O00463 557 aa5.63□□□□□ -1.51
SKA2-210ENST00000584089 HIP1RO75146 1068 aa5.63□□□□□ -1.51
SKA2-210ENST00000584089 SARSP49591 514 aaKnown RBP5.63□□□□□ -1.51
SKA2-210ENST00000584089 GYS2P54840 703 aa5.63□□□□□ -1.51
SKA2-210ENST00000584089 VMACQ2NL98 169 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms