RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 PWP2Q15269 919 aaKnown RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 DNAJC19Q96DA6 116 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 DYNLL2Q96FJ2 89 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.53□□□□□ -0.88
BDNF-219ENST00000584049 PGRMC1O00264 195 aaKnown RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 CDR1P51861 262 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 GSTO1P78417 241 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 RAPGEF1Q13905 1077 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 UAP1Q16222 522 aaPredicted RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 LACTB2Q53H82 288 aaPredicted RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 HYIQ5T013 277 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 SEC14L1Q92503 715 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 SNED1Q8TER0 1413 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 KDM3AQ9Y4C1 1321 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 PPP2R2AP63151 447 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 NEDD9Q14511 834 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 WLSQ5T9L3 541 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 LRRC57Q8N9N7 239 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.53□□□□□ -0.88
BDNF-219ENST00000584049 CNOT10Q9H9A5 744 aaKnown RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 SLC40A1Q9NP59 571 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 TAF1P21675 1872 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 A0A0A6YYK5 440 aaPredicted RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 KCNK3O14649 394 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 BAG3O95817 575 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 CTNNA1P35221 906 aaKnown RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 EDRF1Q3B7T1 1238 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 KLHL7Q8IXQ5 586 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 RASGEF1CQ8N431 466 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 CELF1Q92879 486 aaKnown RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 ZKSCAN4Q969J2 545 aaPredicted RBP9.53□□□□□ -0.88
BDNF-219ENST00000584049 RIOX1Q9H6W3 641 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 INTUQ9ULD6 942 aa9.53□□□□□ -0.88
BDNF-219ENST00000584049 MYH4Q9Y623 1939 aa9.52□□□□□ -0.88
BDNF-219ENST00000584049 LOC102724428A0A0B4J2F2 783 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 KIF1CO43896 1103 aaKnown RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 GHRP10912 638 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 KLRK1P26718 216 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 NOVP48745 357 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 SIK1P57059 783 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 LMBR1Q8WVP7 490 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 DDX20Q9UHI6 824 aaKnown RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 HPDP32754 393 aaPredicted RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 PRKCIP41743 596 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 EIF3BP55884 814 aaKnown RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 RPS8P62241 208 aaKnown RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 GPATCH11Q8N954 259 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 CENPTQ96BT3 561 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.52□□□□□ -0.89
BDNF-219ENST00000584049 NT5C3AQ9H0P0 336 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 FAM114A2Q9NRY5 505 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 ADAMTS1Q9UHI8 967 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 NENFQ9UMX5 172 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 DDX60LQ5H9U9 1706 aaKnown RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 IRS2Q9Y4H2 1338 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 A0A0G2JS52 829 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 GOLGA8HP0CJ92 632 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 NPEPPSP55786 919 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 LRRC41Q15345 812 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 TRADDQ15628 312 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 SLFN11Q7Z7L1 901 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 CACNA2D3Q8IZS8 1091 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 CCDC26Q8TAB7 109 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 PPANQ9NQ55 473 aaKnown RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 SUCLA2Q9P2R7 463 aaPredicted RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 BIN2Q9UBW5 565 aaPredicted RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
BDNF-219ENST00000584049 TTC7AQ9ULT0 858 aaPredicted RBP9.52□□□□□ -0.89
BDNF-219ENST00000584049 ZNF831Q5JPB2 1677 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 COL5A3P25940 1745 aaPredicted RBP9.51□□□□□ -0.89
BDNF-219ENST00000584049 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
BDNF-219ENST00000584049 SLC37A4O43826 429 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 LDHCP07864 332 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 ADCY7P51828 1080 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 ANKRD20A8PQ5CZ79 823 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 C16orf86Q6ZW13 317 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 TATDN2Q93075 761 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
BDNF-219ENST00000584049 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
BDNF-219ENST00000584049 PACSIN1Q9BY11 444 aa9.51□□□□□ -0.89
BDNF-219ENST00000584049 MCM8Q9UJA3 840 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms