RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TCEANC2Q96MN5 208 aa18■□□□□ 0.47
SKA2-209ENST00000583976 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
SKA2-209ENST00000583976 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
SKA2-209ENST00000583976 RALGAPA2Q2PPJ7 1873 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
SKA2-209ENST00000583976 hCG_1642624A0A1W2PR95 340 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 MEIS2O14770 477 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 ARHGAP4P98171 946 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 TRAF1Q13077 416 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 NEDD9Q14511 834 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 UBE2SQ16763 222 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 RUFY4Q6ZNE9 571 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
SKA2-209ENST00000583976 SMARCC2Q8TAQ2 1214 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 UBE2ZQ9H832 354 aaPredicted RBP17.99■□□□□ 0.47
SKA2-209ENST00000583976 CD320Q9NPF0 282 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 PKD2L1Q9P0L9 805 aa17.99■□□□□ 0.47
SKA2-209ENST00000583976 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
SKA2-209ENST00000583976 UPP2O95045 317 aa17.98■□□□□ 0.47
SKA2-209ENST00000583976 PCNX4Q63HM2 1172 aa17.98■□□□□ 0.47
SKA2-209ENST00000583976 DHX32Q7L7V1 743 aaKnown RBP17.98■□□□□ 0.47
SKA2-209ENST00000583976 SRBD1Q8N5C6 995 aaKnown RBP17.98■□□□□ 0.47
SKA2-209ENST00000583976 SEPT8Q92599 483 aa17.98■□□□□ 0.47
SKA2-209ENST00000583976 RRP36Q96EU6 259 aaKnown RBP17.98■□□□□ 0.47
SKA2-209ENST00000583976 INSL6Q9Y581 213 aa17.98■□□□□ 0.47
SKA2-209ENST00000583976 STAM2O75886 525 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 KCNA5P22460 613 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 MARK3P27448 753 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 PSMA5P28066 241 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 ADAM17P78536 824 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
SKA2-209ENST00000583976 BLOC1S2Q6QNY1 142 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 ZBTB10Q96DT7 871 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 TMEM87BQ96K49 555 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 YME1L1Q96TA2 773 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 LMCD1Q9NZU5 365 aa17.97■□□□□ 0.47
SKA2-209ENST00000583976 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
SKA2-209ENST00000583976 ZNF215Q9UL58 517 aaPredicted RBP17.97■□□□□ 0.47
SKA2-209ENST00000583976 FAM86C2PA6NEL3 165 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 PIK3CDO00329 1044 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 ATP9AO75110 1047 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
SKA2-209ENST00000583976 GHRP10912 638 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 KCNA2P16389 499 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 TCF7P36402 384 aaPredicted RBP17.96■□□□□ 0.47
SKA2-209ENST00000583976 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 CUL5Q93034 780 aa17.96■□□□□ 0.47
SKA2-209ENST00000583976 IFIH1Q9BYX4 1025 aaKnown RBP17.96■□□□□ 0.47
SKA2-209ENST00000583976 KIAA1671Q9BY89 1806 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 C5orf42Q9H799 3197 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 CAND2O75155 1236 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 IL9P15248 144 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 ITGB5P18084 799 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 KIF5BP33176 963 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 FGD1P98174 961 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 C11orf16Q9NQ32 467 aa17.95■□□□□ 0.46
SKA2-209ENST00000583976 KAT6AQ92794 2004 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 CCDC69A6NI79 296 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 CSPG5O95196 566 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 CHRNA1P02708 482 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 RPS6KB1P23443 525 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 MGAT3Q09327 533 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 PPFIA1Q13136 1202 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 CCDC82Q8N4S0 544 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 TOP1MTQ969P6 601 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 MRPL38Q96DV4 380 aaKnown RBP17.94■□□□□ 0.46
SKA2-209ENST00000583976 MAP3K14Q99558 947 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 MTA3Q9BTC8 594 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 UPF3BQ9BZI7 483 aaKnown RBP17.94■□□□□ 0.46
SKA2-209ENST00000583976 MYO7AQ13402 2215 aa17.94■□□□□ 0.46
SKA2-209ENST00000583976 GSTTP1A0A1W2PQM5 241 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 H3BQ06 376 aaPredicted RBP17.93■□□□□ 0.46
SKA2-209ENST00000583976 LINC00271P0C7V0 271 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 FAM26DQ5JW98 314 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 Q6ZUG5 572 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 TMTC3Q6ZXV5 915 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 RUFY3Q7L099 469 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 NLRX1Q86UT6 975 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 TMTC2Q8N394 836 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
SKA2-209ENST00000583976 GPRASP2Q96D09 838 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 PGBD1Q96JS3 809 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 SENP7Q9BQF6 1050 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 LRFN3Q9BTN0 628 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 ZSWIM6Q9HCJ5 1215 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 CYP46A1Q9Y6A2 500 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
SKA2-209ENST00000583976 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.92■□□□□ 0.46
SKA2-209ENST00000583976 GNAT1P11488 350 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 PLA2G5P39877 138 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 LIFRP42702 1097 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 ANAPC15P60006 121 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 IGBP1P78318 339 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 GPM6BQ13491 265 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 LPIN1Q14693 890 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 GRIK4Q16099 956 aa17.92■□□□□ 0.46
SKA2-209ENST00000583976 LEXMQ3ZCV2 418 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms