RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
NUP85-224ENST00000583948 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
NUP85-224ENST00000583948 PHF7Q9BWX1 381 aaPredicted RBP13.35□□□□□ -0.27
NUP85-224ENST00000583948 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
NUP85-224ENST00000583948 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
NUP85-224ENST00000583948 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
NUP85-224ENST00000583948 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
NUP85-224ENST00000583948 RALYQ9UKM9 306 aaKnown RBP13.35□□□□□ -0.27
NUP85-224ENST00000583948 EMSYQ7Z589 1322 aa13.35□□□□□ -0.27
NUP85-224ENST00000583948 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
NUP85-224ENST00000583948 BRD1O95696 1058 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 SMIM10L2AP0DMW4 78 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 SMIM10L2BP0DMW5 78 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 GHRP10912 638 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 COASYQ13057 564 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
NUP85-224ENST00000583948 PKN1Q16512 942 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 ZBTB33Q86T24 672 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 EFHBQ8N7U6 833 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 DCAF4Q8WV16 495 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 ESYT1Q9BSJ8 1104 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 C16orf70Q9BSU1 422 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 HCSTQ9UBK5 93 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
NUP85-224ENST00000583948 C17orf102A2RUQ5 167 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 CHRNA1P02708 482 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 ICAM3P32942 547 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 RRP12Q5JTH9 1297 aaKnown RBP13.33□□□□□ -0.28
NUP85-224ENST00000583948 VPS53Q5VIR6 699 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 RUFY4Q6ZNE9 571 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 TRIM50Q86XT4 487 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 KREMEN2Q8NCW0 462 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 IL31RAQ8NI17 732 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 PPTC7Q8NI37 304 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
NUP85-224ENST00000583948 SPATA33Q96N06 139 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 NAPBQ9H115 298 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.28
NUP85-224ENST00000583948 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 HIP1O00291 1037 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 ENPP3O14638 875 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 PI15O43692 258 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 REC8O95072 547 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 GGPS1O95749 300 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 RB1P06400 928 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 ASGR2P07307 311 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 PDHBP11177 359 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 MYCLP12524 364 aaPredicted RBP13.32□□□□□ -0.28
NUP85-224ENST00000583948 PWP2Q15269 919 aaKnown RBP13.32□□□□□ -0.28
NUP85-224ENST00000583948 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 LLGL2Q6P1M3 1020 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 KIAA2013Q8IYS2 634 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 NKD2Q969F2 451 aaPredicted RBP13.32□□□□□ -0.28
NUP85-224ENST00000583948 ZNF689Q96CS4 500 aaPredicted RBP13.32□□□□□ -0.28
NUP85-224ENST00000583948 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
NUP85-224ENST00000583948 WEE2P0C1S8 567 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 LAMC2Q13753 1193 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 STXBP2Q15833 593 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 ARHGEF16Q5VV41 709 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 CWC27Q6UX04 472 aaKnown RBP13.31□□□□□ -0.28
NUP85-224ENST00000583948 RTN4RL1Q86UN2 441 aaPredicted RBP13.31□□□□□ -0.28
NUP85-224ENST00000583948 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 SUSD6Q92537 303 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 KATNAL1Q9BW62 490 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
NUP85-224ENST00000583948 TPRP12270 2363 aaKnown RBP13.31□□□□□ -0.28
NUP85-224ENST00000583948 TTC3P53804 2025 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 SPTBN2O15020 2390 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 NR3C2P08235 984 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 NOVP48745 357 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 ERVFC1P60507 584 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 ZNF543Q08ER8 600 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
NUP85-224ENST00000583948 LPIN1Q14693 890 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 CELF3Q5SZQ8 465 aaKnown RBP13.3□□□□□ -0.28
NUP85-224ENST00000583948 DGLUCYQ7Z3D6 616 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
NUP85-224ENST00000583948 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
NUP85-224ENST00000583948 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 TLE6Q9H808 572 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
NUP85-224ENST00000583948 H3BRB1 525 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 DGKIO75912 1065 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 HOXD8P13378 290 aaPredicted RBP13.29□□□□□ -0.28
NUP85-224ENST00000583948 GNAT2P19087 354 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
NUP85-224ENST00000583948 HOXC8P31273 242 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 DCLK2Q8N568 766 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 MICAL1Q8TDZ2 1067 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms