RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	RETREG2	Q8NC44	543 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	CAGE1	Q8TC20	777 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	CRYGN	Q8WXF5	182 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	RIT2	Q99578	217 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	TEKT3	Q9BXF9	490 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	HIPK3	Q9H422	1215 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	SAMM50	Q9Y512	469 aa		11.21	□□□□□ -0.61
NARF-222	ENST00000583908	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	C17orf102	A2RUQ5	167 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	DDX39A	O00148	427 aa	Known RBP	11.2	□□□□□ -0.62
NARF-222	ENST00000583908	CCNT1	O60563	726 aa	Known RBP	11.2	□□□□□ -0.62
NARF-222	ENST00000583908	ATP9A	O75110	1047 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	PSAP	P07602	524 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	AR	P10275	920 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	CYP3A7	P24462	503 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	FOSB	P53539	338 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	ACTR2	P61160	394 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	FPGS	Q05932	587 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	FAAP100	Q0VG06	881 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	ORC2	Q13416	577 aa	Predicted RBP	11.2	□□□□□ -0.62
NARF-222	ENST00000583908	PPIG	Q13427	754 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	4e-11	■■■□□ 16.6
NARF-222	ENST00000583908	PTGIS	Q16647	500 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	LRCH2	Q5VUJ6	765 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	CHRDL2	Q6WN34	429 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	SLFN12	Q8IYM2	578 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	RDM1	Q8NG50	284 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	FAM20A	Q96MK3	541 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	UBE2O	Q9C0C9	1292 aa	Known RBP	11.2	□□□□□ -0.62
NARF-222	ENST00000583908	MTIF3	Q9H2K0	278 aa	Known RBP	11.2	□□□□□ -0.62
NARF-222	ENST00000583908	FOXP1	Q9H334	677 aa	Predicted RBP	11.2	□□□□□ -0.62
NARF-222	ENST00000583908	GTF2IRD1	Q9UHL9	959 aa		11.2	□□□□□ -0.62
NARF-222	ENST00000583908	SCN10A	Q9Y5Y9	1956 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	ALPK3	Q96L96	1907 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	NRCAM	Q92823	1304 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	HAS3	O00219	553 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	PITPNM1	O00562	1244 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	TBX3	O15119	743 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	B4GALT4	O60513	344 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	DKC1	O60832	514 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
NARF-222	ENST00000583908	PARN	O95453	639 aa	Known RBP	11.19	□□□□□ -0.62
NARF-222	ENST00000583908	TIMP1	P01033	207 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	CD4	P01730	458 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	HSP90AA1	P07900	732 aa	Known RBP	11.19	□□□□□ -0.62
NARF-222	ENST00000583908	PFKM	P08237	780 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	MAGEA10	P43363	369 aa	Predicted RBP	11.19	□□□□□ -0.62
NARF-222	ENST00000583908	STAT5B	P51692	787 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	ST3GAL1	Q11201	340 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	ITGB3BP	Q13352	177 aa	Predicted RBP	11.19	□□□□□ -0.62
NARF-222	ENST00000583908	NPY5R	Q15761	445 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	RSPH3	Q86UC2	560 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	CKAP2L	Q8IYA6	745 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	FBXO18	Q8NFZ0	1043 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	CYP2W1	Q8TAV3	490 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	ATP6V0A1	Q93050	837 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	FAM167A	Q96KS9	214 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	C16orf70	Q9BSU1	422 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	TBX21	Q9UL17	535 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	CEP131	Q9UPN4	1083 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	TRPC6	Q9Y210	931 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	PCDHA10	Q9Y5I2	948 aa		11.19	□□□□□ -0.62
NARF-222	ENST00000583908	RRN3P2	A6NIE6	340 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	BTBD18	B2RXH4	712 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908		K7ELQ4	463 aa	Predicted RBP	11.18	□□□□□ -0.62
NARF-222	ENST00000583908	MSH4	O15457	936 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	NEMF	O60524	1076 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	CAND2	O75155	1236 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	LGR5	O75473	907 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	TDP2	O95551	362 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	SMIM10L2A	P0DMW4	78 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	SMIM10L2B	P0DMW5	78 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	GJB2	P29033	226 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	BMP8B	P34820	402 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	RFC2	P35250	354 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	TRAPPC10	P48553	1259 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	MDM2	Q00987	491 aa	Predicted RBP	11.18	□□□□□ -0.62
NARF-222	ENST00000583908	GUCY1B3	Q02153	619 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	PPFIA1	Q13136	1202 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	NR5A1	Q13285	461 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	PTK7	Q13308	1070 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	MFSD5	Q6N075	450 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	PDXDC2P	Q6P474	469 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.18	□□□□□ -0.62
NARF-222	ENST00000583908	PLPPR4	Q7Z2D5	763 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	RPUSD2	Q8IZ73	545 aa	Known RBP	11.18	□□□□□ -0.62
NARF-222	ENST00000583908	AFAP1L1	Q8TED9	768 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	KAT2B	Q92831	832 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	PPP1R12C	Q9BZL4	782 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	TRPV6	Q9H1D0	765 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	ZNF302	Q9NR11	478 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	TRMT13	Q9NUP7	481 aa	Known RBP	11.18	□□□□□ -0.62
NARF-222	ENST00000583908	HDAC6	Q9UBN7	1215 aa		11.18	□□□□□ -0.62
NARF-222	ENST00000583908	GRIN2D	O15399	1336 aa		11.17	□□□□□ -0.62
NARF-222	ENST00000583908	TRIM43B	A6NCK2	446 aa		11.17	□□□□□ -0.62
NARF-222	ENST00000583908	CHMP2A	O43633	222 aa		11.17	□□□□□ -0.62
NARF-222	ENST00000583908	PDIA4	P13667	645 aa	Known RBP	11.17	□□□□□ -0.62
NARF-222	ENST00000583908	MARK3	P27448	753 aa		11.17	□□□□□ -0.62
NARF-222	ENST00000583908	CALCRL	Q16602	461 aa		11.17	□□□□□ -0.62
NARF-222	ENST00000583908	MCTP1	Q6DN14	999 aa		11.17	□□□□□ -0.62
NARF-222	ENST00000583908	GDF6	Q6KF10	455 aa	Predicted RBP	11.17	□□□□□ -0.62
NARF-222	ENST00000583908	TAF2	Q6P1X5	1199 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms