RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 GPT2Q8TD30 523 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 KCNG4Q8TDN1 519 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 AFG1LQ8WV93 481 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 Q9Y3F1 56 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 SAMM50Q9Y512 469 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 LIG1P18858 919 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 PRPHP41219 470 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-216ENST00000583804 BEX3Q00994 111 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 KRT76Q01546 638 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 IL17AQ16552 155 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 BRDTQ58F21 947 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-216ENST00000583804 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
TOP3A-216ENST00000583804 LHX8Q68G74 356 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 FSIP1Q8NA03 581 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-216ENST00000583804 RAB34Q9BZG1 259 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-216ENST00000583804 FBXO2Q9UK22 296 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-216ENST00000583804 VAV3Q9UKW4 847 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 TELO2Q9Y4R8 837 aa12.33□□□□□ -0.44
TOP3A-216ENST00000583804 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 TRAK2O60296 914 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 CAPN15O75808 1086 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 CCNE2O96020 404 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 PTMSP20962 102 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 CPT1AP50416 773 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 GJA9P57773 515 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 ACTR2P61160 394 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 UBE2HP62256 183 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
TOP3A-216ENST00000583804 GNASQ5JWF2 1037 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 ZNF746Q6NUN9 644 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-216ENST00000583804 MIER3Q7Z3K6 550 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 KRI1Q8N9T8 703 aaKnown RBP12.32□□□□□ -0.44
TOP3A-216ENST00000583804 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 PAK6Q9NQU5 681 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-216ENST00000583804 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
TOP3A-216ENST00000583804 ELP1O95163 1332 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 MYADML2A6NDP7 307 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 POTEMA6NI47 508 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 PP2D1A8MPX8 630 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 EML1O00423 815 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 BACH1O14867 736 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 PPP6R2O75170 966 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
TOP3A-216ENST00000583804 CDC25AP30304 524 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
TOP3A-216ENST00000583804 JAK3P52333 1124 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 PPP2R5CQ13362 524 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 ZRSR1Q15695 479 aaKnown RBP12.31□□□□□ -0.44
TOP3A-216ENST00000583804 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
TOP3A-216ENST00000583804 MIS18BP1Q6P0N0 1132 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 RNF180Q86T96 592 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 SMAP1Q8IYB5 467 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-216ENST00000583804 PPTC7Q8NI37 304 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 GPR20Q99678 358 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 PCDHA10Q9Y5I2 948 aa12.31□□□□□ -0.44
TOP3A-216ENST00000583804 SRPRBQ9Y5M8 271 aaKnown RBP12.31□□□□□ -0.44
TOP3A-216ENST00000583804 A6NJR5 290 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 ZEB2O60315 1214 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 PPFIA4O75335 1185 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 PSAPP07602 524 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 GJB1P08034 283 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 MMP3P08254 477 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 MYL3P08590 195 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 SFNP31947 248 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 TCF7P36402 384 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-216ENST00000583804 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 PDIA5Q14554 519 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 DGKDQ16760 1214 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-216ENST00000583804 SWSAP1Q6NVH7 229 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
TOP3A-216ENST00000583804 SHC4Q6S5L8 630 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 ARRDC4Q8NCT1 418 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
TOP3A-216ENST00000583804 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
TOP3A-216ENST00000583804 UPF3AQ9H1J1 476 aaKnown RBP12.3□□□□□ -0.44
TOP3A-216ENST00000583804 CTAGE5O15320 804 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 CUTAO60888 179 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 SGPL1O95470 568 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 SUPT20HL2P0C7V6 817 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 PFKFB1P16118 471 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms