RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
SMCHD1-209ENST00000583441 FOXN1O15353 648 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 NUDT3O95989 172 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 ITGA4P13612 1032 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 CD247P20963 164 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 ACRV1P26436 265 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 PMS1P54277 932 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 SLC7A5Q01650 507 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 TDRD10Q5VZ19 366 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 C6orf15Q6UXA7 325 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 IFNL2Q8IZJ0 200 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 ST7Q9NRC1 585 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 TBX22Q9Y458 520 aa5.51□□□□□ -1.53
SMCHD1-209ENST00000583441 CCDC85CA6NKD9 419 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 AURKAO14965 403 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 GJB6O95452 261 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 PAMP19021 973 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 FSTL1Q12841 308 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 ZYXQ15942 572 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 POLNQ7Z5Q5 900 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 PLEKHO2Q8TD55 490 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 ZNF764Q96H86 408 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 SLC2A4RGQ9NR83 387 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 MARCH2Q9P0N8 246 aa5.5□□□□□ -1.53
SMCHD1-209ENST00000583441 TRBV23OR9-2A0A075B6M9 112 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 NPHP3-ACAD11A0A0J9YXS1 232 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 C7orf72A4D263 438 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 IQCA1LA6NCM1 817 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 TMEM191CA6NGB0 347 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 STXBP3O00186 592 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 RAD17O75943 681 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 CLSTN1O94985 981 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 KRT4P19013 534 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 ADRA1BP35368 520 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 C21orf58P58505 322 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 PPP2R5DQ14738 602 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 GNPTABQ3T906 1256 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 MTERF2Q49AM1 385 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 ZNF362Q5T0B9 420 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 SDE2Q6IQ49 451 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 FAM177A1Q8N128 213 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 NUDT10Q8NFP7 164 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 NUDT11Q96G61 164 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 TMEM209Q96SK2 561 aa5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 DIS3Q9Y2L1 958 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-209ENST00000583441 CADPSQ9ULU8 1353 aa5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 B2RBV5 119 aa5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 AGRPO00253 132 aa5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 AXDND1Q5T1B0 1012 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 LAIR1Q6GTX8 287 aa5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 KIAA1211LQ6NV74 962 aa5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 NEIL1Q96FI4 390 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 MCMBPQ9BTE3 642 aa5.48□□□□□ -1.53
SMCHD1-209ENST00000583441 ANKRD34BA5PLL1 514 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 FAM221BA6H8Z2 402 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 ENPP3O14638 875 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 SUSD5O60279 629 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 CDK4P11802 303 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 MAMDC4Q6UXC1 1216 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 Q6ZUG5 572 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 JAZF1Q86VZ6 243 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 LRRC47Q8N1G4 583 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 MICAL1Q8TDZ2 1067 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 KLHL6Q8WZ60 621 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 TOE1Q96GM8 510 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 GBP3Q9H0R5 595 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 ZNF451Q9Y4E5 1061 aa5.47□□□□□ -1.53
SMCHD1-209ENST00000583441 A0A087WZG4 1122 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 C2orf71A6NGG8 1288 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 PROB1E7EW31 1015 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 TP53P04637 393 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 SLC6A11P48066 632 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 TCEAL1Q15170 157 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 ZNF568Q3ZCX4 644 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 TAF7LQ5H9L4 462 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 ZC3H12BQ5HYM0 836 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 PAPD7Q5XG87 772 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 MRM1Q6IN84 353 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 SYCE2Q6PIF2 218 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 THAP3Q8WTV1 239 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 SGSM3Q96HU1 749 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 DNAJC7Q99615 494 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 HAUS7Q99871 368 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 PCDHB10Q9UN67 800 aa5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 MRPL42Q9Y6G3 142 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-209ENST00000583441 INO80B-WBP1J3KQ70 363 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 HSD3B2P26439 372 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 RAC3P60763 192 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 SSRP1Q08945 709 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 LONRF2Q1L5Z9 754 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 DPY19L1Q2PZI1 675 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 SLC10A6Q3KNW5 377 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 C2orf27AQ580R0 203 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 Q6ZPA2 131 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 GPR155Q7Z3F1 870 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 PPFIBP1Q86W92 1011 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 CRACR2BQ8N4Y2 399 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 APBA2Q99767 749 aa5.45□□□□□ -1.54
SMCHD1-209ENST00000583441 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms