RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 UNC45AQ9H3U1 944 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 LRRC37A2A6NM11 1700 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 A0A1B0GVL5 298 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 PP2D1A8MPX8 630 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 DDX39AO00148 427 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ADCY3O60266 1144 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 UBA1P22314 1058 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ADCYAP1R1P41586 468 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CELF3Q5SZQ8 465 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TMEM63BQ5T3F8 832 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 NCAPH2Q6IBW4 605 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CYFIP1Q7L576 1253 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MRPS27Q92552 414 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MMTAG2Q9BU76 263 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 PRO3102Q9H379 93 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GOLPH3LQ9H4A5 285 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ZHX1Q9UKY1 873 aaPredicted RBP18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 HPSEQ9Y251 543 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 STK24Q9Y6E0 443 aa18.39■□□□□ 0.53
CDK5RAP3-228ENST00000583363 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SGPL1O95470 568 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CCNE2O96020 404 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ELNP15502 786 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 UBA7P41226 1012 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 KRT76Q01546 638 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 EPHA7Q15375 998 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CCDC144BQ3MJ40 725 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ZNF746Q6NUN9 644 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GPT2Q8TD30 523 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 JPH1Q9HDC5 661 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SLC9A2Q9UBY0 812 aa18.38■□□□□ 0.53
CDK5RAP3-228ENST00000583363 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SLC26A4O43511 780 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CHMP2AO43633 222 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GGPS1O95749 300 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 INHAP05111 366 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 PFKFB1P16118 471 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SMPD1P17405 629 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 LIG1P18858 919 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 NDUFA8P51970 172 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 DUSP28Q4G0W2 176 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 KRT79Q5XKE5 535 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 METTL7BQ6UX53 244 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MIER3Q7Z3K6 550 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CABP7Q86V35 215 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TRPV1Q8NER1 839 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ENGASEQ8NFI3 743 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 RDM1Q8NG50 284 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 COPS5Q92905 334 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 HSD17B14Q9BPX1 270 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MLXIPQ9HAP2 919 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 KCNH3Q9ULD8 1083 aa18.37■□□□□ 0.53
CDK5RAP3-228ENST00000583363 NKRFO15226 690 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SORBS3O60504 671 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ATG7O95352 703 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CYBAP13498 195 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SFNP31947 248 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TNFAIP2Q03169 654 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CACNB2Q08289 660 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TRIM32Q13049 653 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SNW1Q13573 536 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 LAMC2Q13753 1193 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ERMNQ8TAM6 284 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 EIF2AK1Q9BQI3 630 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 DISC1Q9NRI5 854 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 FAM184BQ9ULE4 1060 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TELO2Q9Y4R8 837 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 NR2E3Q9Y5X4 410 aa18.36■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GSTTP1A0A1W2PQM5 241 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 WDR64B1ANS9 1081 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SLITRK3O94933 977 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MBD3O95983 291 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GH1P01241 217 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 HMGCRP04035 888 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SPATA31C1P0DKV0 1188 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 RPA1P27694 616 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TXLNAP40222 546 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SYKP43405 635 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 JAK3P52333 1124 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ACTR2P61160 394 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 FAM160A1Q05DH4 1040 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 HYIQ5T013 277 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ABHD15Q6UXT9 468 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CCDC73Q6ZRK6 1079 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 FMR1NBQ8N0W7 255 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SNX29Q8TEQ0 813 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 EMID1Q96A84 441 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 PNMA5Q96PV4 448 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TCEAL9Q9UHQ7 104 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GNEQ9Y223 722 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 PCDHA10Q9Y5I2 948 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
CDK5RAP3-228ENST00000583363 A0A087X0B3 334 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms