RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 CTCFLQ8NI51 663 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 APBB2Q92870 758 aa11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 TOP1MTQ969P6 601 aa11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 RRP36Q96EU6 259 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 EYSQ5T1H1 3165 aa11.15□□□□□ -0.62
CDK5RAP3-227ENST00000583352 NCOR1O75376 2440 aa11.15□□□□□ -0.63
CDK5RAP3-227ENST00000583352 BAZ2BQ9UIF8 2168 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SPTBN5Q9NRC6 3674 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 H3BNC9 293 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GPR37L1O60883 481 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 KIF5BP33176 963 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NEK4P51957 841 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SP4Q02446 784 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TRIM50Q86XT4 487 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TMEM192Q8IY95 271 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SENP7Q9BQF6 1050 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SPZ1Q9BXG8 430 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 IFIH1Q9BYX4 1025 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SEC63Q9UGP8 760 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RBM8AQ9Y5S9 174 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 DOCK5Q9H7D0 1870 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PI4K2BG5E9Z4 385 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SLC27A2O14975 620 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ST18O60284 1047 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 DDAH1O94760 285 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 IL9P15248 144 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SMARCA1P28370 1054 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MCM2P49736 904 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ANTXR2P58335 489 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ADAM17P78536 824 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 FAM26DQ5JW98 314 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 FAM178BQ8IXR5 827 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ZNF654Q8IZM8 581 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GJD3Q8N144 294 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 BANK1Q8NDB2 785 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 IGDCC4Q8TDY8 1250 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.637e-8■■□□□ 13.1
CDK5RAP3-227ENST00000583352 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 OSBPL7Q9BZF2 842 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CD320Q9NPF0 282 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CHMP5Q9NZZ3 219 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TAF6LQ9Y6J9 622 aa11.13□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CHD9Q3L8U1 2897 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 FAM86C2PA6NEL3 165 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GNAQP50148 359 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TCEAL5Q5H9L2 206 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TAF2Q6P1X5 1199 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RSPH3Q86UC2 560 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 FIBCD1Q8N539 461 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NEK9Q8TD19 979 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MTA3Q9BTC8 594 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MYL10Q9BUA6 226 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SLKQ9H2G2 1235 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NSUN3Q9H649 340 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ZSWIM6Q9HCJ5 1215 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TELO2Q9Y4R8 837 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
CDK5RAP3-227ENST00000583352 KAT6AQ92794 2004 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 VCANP13611 3396 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MEIS2O14770 477 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GHRP10912 638 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CTNNB1P35222 781 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PPFIA1Q13136 1202 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CUL4AQ13619 759 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RPAINQ86UA6 219 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TMTC2Q8N394 836 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 LY9Q9HBG7 655 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 936.5 ms