RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FLT3LGP49771 235 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 OAZ1P54368 228 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 ERVK-24P63145 666 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 PRKCZQ05513 592 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 NCAPHQ15003 741 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 TKFCQ3LXA3 575 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 CEP55Q53EZ4 464 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 ARHGEF16Q5VV41 709 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 DYMQ7RTS9 669 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 FAM114A1Q8IWE2 563 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 TRMT44Q8IYL2 757 aaKnown RBP10.35□□□□□ -0.75
SS18-220ENST00000582092 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 SOCS4Q8WXH5 440 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 DHTKD1Q96HY7 919 aaPredicted RBP10.35□□□□□ -0.75
SS18-220ENST00000582092 TSG101Q99816 390 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 NUDT12Q9BQG2 462 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 PDE4DIPQ5VU43 2346 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 PPP1R3GB7ZBB8 358 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 PES1O00541 588 aaKnown RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 MSH4O15457 936 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 PLA2G4BP0C869 781 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 TAL1P17542 331 aaPredicted RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 BMP6P22004 513 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 CTGFP29279 349 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 PRCPP42785 496 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 HSD17B4P51659 736 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 CAP1Q01518 475 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 TMEM119Q4V9L6 283 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 NAALADL2Q58DX5 795 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 HSP90AA4PQ58FG1 418 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 WDR78Q5VTH9 848 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 SNRNP48Q6IEG0 339 aaKnown RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 LBX2Q6XYB7 198 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 UNC13DQ70J99 1090 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 PPFIBP1Q86W92 1011 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 GPBP1Q86WP2 473 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 SMYD4Q8IYR2 804 aaPredicted RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 CCDC150Q8NCX0 1101 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 SH3TC2Q8TF17 1288 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 ATG4CQ96DT6 458 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 CCDC43Q96MW1 224 aaKnown RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 ZNF830Q96NB3 372 aaPredicted RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 PNMA5Q96PV4 448 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 MXRA8Q9BRK3 442 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 MMTAG2Q9BU76 263 aaKnown RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 TRIM9Q9C026 710 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 RNF146Q9NTX7 359 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 PANK4Q9NVE7 773 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 MAPK8IP1Q9UQF2 711 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 MYH7BA7E2Y1 1941 aa10.34□□□□□ -0.75
SS18-220ENST00000582092 ZNFX1Q9P2E3 1918 aaKnown RBP10.34□□□□□ -0.75
SS18-220ENST00000582092 B4DLN1 442 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 OPLAHO14841 1288 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 CHMP2AO43633 222 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 MYCP01106 439 aaPredicted RBP10.33□□□□□ -0.76
SS18-220ENST00000582092 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 ATP1A3P13637 1013 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 SFPQP23246 707 aaKnown RBP eCLIP10.33□□□□□ -0.76
SS18-220ENST00000582092 RPA1P27694 616 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 CCND2P30279 289 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 CLCN1P35523 988 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 STAT3P40763 770 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 HYIQ5T013 277 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 XRRA1Q6P2D8 792 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 NIPA1Q7RTP0 329 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 MIER3Q7Z3K6 550 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 PLEKHH3Q7Z736 793 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 TPH2Q8IWU9 490 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 GIMAP8Q8ND71 665 aaPredicted RBP10.33□□□□□ -0.76
SS18-220ENST00000582092 ETNPPLQ8TBG4 499 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 DDX12PQ92771 950 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 GJA10Q969M2 543 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 MPHOSPH6Q99547 160 aaKnown RBP10.33□□□□□ -0.76
SS18-220ENST00000582092 MTRQ99707 1265 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 POLR3CQ9BUI4 534 aaPredicted RBP10.33□□□□□ -0.76
SS18-220ENST00000582092 MAF1Q9H063 256 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 RNF208Q9H0X6 261 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 TUFT1Q9NNX1 390 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 RBPJLQ9UBG7 517 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 GABRQQ9UN88 632 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 SAMM50Q9Y512 469 aa10.33□□□□□ -0.76
SS18-220ENST00000582092 MYMKA6NI61 221 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 E9PMD0 336 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 IPO5O00410 1097 aaKnown RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 NFIBO00712 420 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 N4BP3O15049 544 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 STRNO43815 780 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 EDIL3O43854 480 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 TBCAO75347 108 aaKnown RBP10.32□□□□□ -0.76
SS18-220ENST00000582092 HMGCRP04035 888 aa10.32□□□□□ -0.76
SS18-220ENST00000582092 XRCC5P13010 732 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms