RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CYP4A11Q02928 519 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 PPATQ06203 517 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 LRMPQ12912 555 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 PSMD2Q13200 908 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 PPIL2Q13356 520 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 PLS1Q14651 629 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 FILIP1LQ4L180 1135 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 ARHGEF16Q5VV41 709 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
MKS1-211ENST00000581761 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 ANKRD20A12PQ8NF67 263 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 P2RX5Q93086 422 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 HPS3Q969F9 1004 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 ACAD9Q9H845 621 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 PXMP2Q9NR77 195 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 INTS13Q9NVM9 706 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 RNF186Q9NXI6 227 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 ZNF214Q9UL59 606 aaPredicted RBP16.3■□□□□ 0.2
MKS1-211ENST00000581761 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
MKS1-211ENST00000581761 A0A1B0GTH6 734 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
MKS1-211ENST00000581761 IPO5O00410 1097 aaKnown RBP16.29■□□□□ 0.2
MKS1-211ENST00000581761 IGF2BP3O00425 579 aaKnown RBP eCLIP16.29■□□□□ 0.2
MKS1-211ENST00000581761 BCRP11274 1271 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 ITGB5P18084 799 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 CYP11B2P19099 503 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 SLC12A3P55017 1021 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 COASYQ13057 564 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 ARID5BQ14865 1188 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 PGM5Q15124 567 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 EPHA7Q15375 998 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 CCDC65Q8IXS2 484 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 KIAA0895Q8NCT3 520 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
MKS1-211ENST00000581761 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 DNAJC19Q96DA6 116 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 RIT2Q99578 217 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 UNC45AQ9H3U1 944 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 JADE2Q9NQC1 790 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
MKS1-211ENST00000581761 A0A0G2JLL6 359 aaPredicted RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 MANSC4A6NHS7 340 aaPredicted RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 DDX39AO00148 427 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 CXCL11O14625 94 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 EYA4O95677 639 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 CCND2P30279 289 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 PSMC6P62333 389 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
MKS1-211ENST00000581761 MOGSQ13724 837 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 KCNJ12Q14500 433 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 NR1I3Q14994 352 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 APTXQ7Z2E3 356 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 PRRT2Q7Z6L0 340 aaPredicted RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 LRRC8AQ8IWT6 810 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 KCTD17Q8N5Z5 321 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 THAP9Q9H5L6 903 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 AGO4Q9HCK5 861 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 KCNH7Q9NS40 1196 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 LIMA1Q9UHB6 759 aaKnown RBP16.28■□□□□ 0.2
MKS1-211ENST00000581761 KCNH4Q9UQ05 1017 aa16.28■□□□□ 0.2
MKS1-211ENST00000581761 GTF2A2P52657 109 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 COPB1P53618 953 aaKnown RBP16.27■□□□□ 0.2
MKS1-211ENST00000581761 EHHADHQ08426 723 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 KRT31Q15323 416 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 PTPN21Q16825 1174 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 FAM26FQ5R3K3 315 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 TTI2Q6NXR4 508 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 XRRA1Q6P2D8 792 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 TPH2Q8IWU9 490 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
MKS1-211ENST00000581761 PURBQ96QR8 312 aaKnown RBP16.27■□□□□ 0.2
MKS1-211ENST00000581761 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 SRRTQ9BXP5 876 aaKnown RBP16.27■□□□□ 0.2
MKS1-211ENST00000581761 MAF1Q9H063 256 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 R3HDMLQ9H3Y0 253 aa16.27■□□□□ 0.2
MKS1-211ENST00000581761 MAGEC2Q9UBF1 373 aaPredicted RBP16.27■□□□□ 0.2
MKS1-211ENST00000581761 PTPRFP10586 1907 aa16.27■□□□□ 0.19
MKS1-211ENST00000581761 LOC285556D6RIA3 1793 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 CASP8AP2Q9UKL3 1982 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms