RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 ENPP3O14638 875 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 LGALS2P05162 132 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 TGFB3P10600 412 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 GNAT1P11488 350 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 CDC37Q16543 378 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 TSHZ3Q63HK5 1081 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 FRMD5Q7Z6J6 570 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 MIER1Q8N108 512 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 ADSSL1Q8N142 457 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 POF1BQ8WVV4 589 aa16.18■□□□□ 0.18
CSNK1D-219ENST00000581660 CHRNA1P02708 482 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 HSPD1P10809 573 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 MS4A1P11836 297 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 SP2Q02086 613 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 UBALD2Q8IYN6 164 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 VN1R2Q8NFZ6 395 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 PDCD2LQ9BRP1 358 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
CSNK1D-219ENST00000581660 GHRP10912 638 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 HSD17B4P51659 736 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 LPIN1Q14693 890 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 ALX1Q15699 326 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 RBM23Q86U06 439 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 CDCA3Q99618 268 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 CPVLQ9H3G5 476 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 TLE6Q9H808 572 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 SETD4Q9NVD3 440 aa16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-219ENST00000581660 MED19A0JLT2 244 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 SORBS3O60504 671 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.183e-18■□□□□ 9.1
CSNK1D-219ENST00000581660 MGAT3Q09327 533 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 ZBTB33Q86T24 672 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 KREMEN2Q8NCW0 462 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 S1PR5Q9H228 398 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 PCDHGC5Q9Y5F6 944 aa16.15■□□□□ 0.18
CSNK1D-219ENST00000581660 OPLAHO14841 1288 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 UBE3AQ05086 875 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 MTMR3Q13615 1198 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 KCNC3Q14003 757 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 DUSP6Q16828 381 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 QRICH1Q2TAL8 776 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 ASTLQ6HA08 431 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 LINC01599Q8WXQ3 324 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 MAP3K20Q9NYL2 800 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 SORCS3Q9UPU3 1222 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 PLXNA4Q9HCM2 1894 aa16.14■□□□□ 0.17
CSNK1D-219ENST00000581660 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 RBM10P98175 930 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 FBXO47Q5MNV8 452 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 TAF2Q6P1X5 1199 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 NPAS4Q8IUM7 802 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 ADGRF4Q8IZF3 695 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 TTC41PQ6P2S7 1318 aa16.13■□□□□ 0.17
CSNK1D-219ENST00000581660 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 MYH6P13533 1939 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 ZFHX4Q86UP3 3567 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 BRD1O95696 1058 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 CFBP00751 764 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 MYCLP12524 364 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 CLCN5P51795 746 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 ARHGAP4P98171 946 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 PGM5Q15124 567 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 IL31RAQ8NI17 732 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 RMDN1Q96DB5 314 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 ZNF215Q9UL58 517 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 MYO10Q9HD67 2058 aa16.12■□□□□ 0.17
CSNK1D-219ENST00000581660 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 PER2O15055 1255 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 SRGAP2BP0DMP2 458 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 ANKRD54Q6NXT1 300 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 SYCE2Q6PIF2 218 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 METTL7BQ6UX53 244 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 RUFY4Q6ZNE9 571 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 DGKHQ86XP1 1220 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 TRIM50Q86XT4 487 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 SAMD3Q8N6K7 520 aa16.11■□□□□ 0.17
CSNK1D-219ENST00000581660 RASGRP4Q8TDF6 673 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms