RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ZFR2Q9UPR6 939 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 NPIPB8E9PQR5 432 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 KRIT1O00522 736 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 CKMP06732 381 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 PRKD1Q15139 912 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 PAN2Q504Q3 1202 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 CD276Q5ZPR3 534 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 EDAQ92838 391 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 LMF1Q96S06 567 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 PTPN22Q9Y2R2 807 aa5.92□□□□□ -1.46
SMCHD1-206ENST00000581631 PLSCR1O15162 318 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 LTFP02788 710 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 TUSC3Q13454 348 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 SLC10A6Q3KNW5 377 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 TNNI3KQ59H18 835 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 LARP1BQ659C4 914 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 Q6ZSN1 163 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 RBM12BQ8IXT5 1001 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 INPP5FQ9Y2H2 1132 aa5.91□□□□□ -1.46
SMCHD1-206ENST00000581631 A0A1W2PQU0 124 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 ZNF839A8K0R7 811 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 DLX3O60479 287 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 ZNF888P0CJ79 500 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 EPHA5P54756 1037 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 MFAP1P55081 439 aaKnown RBP5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 DUSP8Q13202 625 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 AGBL4Q5VU57 503 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 RSPO2Q6UXX9 243 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 FUKQ8N0W3 1084 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 AMER2Q8N7J2 671 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 NEIL1Q96FI4 390 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 LRRC37BQ96QE4 947 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 KIAA1522Q9P206 1035 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 PRKAG3Q9UGI9 489 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 MRVI1Q9Y6F6 885 aa5.9□□□□□ -1.46
SMCHD1-206ENST00000581631 PFKPQ01813 784 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 FHL2Q14192 279 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 HS1BP3Q53T59 392 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 KCTD13Q8WZ19 329 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 ADOQ96SZ5 270 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 PHF20Q9BVI0 1012 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 ZNF341Q9BYN7 854 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 EPN3Q9H201 632 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 ARHGAP20Q9P2F6 1191 aa5.89□□□□□ -1.47
SMCHD1-206ENST00000581631 ACOT7O00154 380 aa5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 NKRFO15226 690 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 NARSO43776 548 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 GJB6O95452 261 aa5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 GLRBP48167 497 aa5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 PURAQ00577 322 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 USP10Q14694 798 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 IER2Q9BTL4 223 aa5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 SLC30A1Q9Y6M5 507 aa5.88□□□□□ -1.47
SMCHD1-206ENST00000581631 H0Y858 1186 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 RAD17O75943 681 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 DDAH1O94760 285 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 FBXO21O94952 628 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 ENO2P09104 434 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 COMTP21964 271 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 GRK2P25098 689 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 GRK3P35626 688 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 ETFBP38117 255 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 TGFB2P61812 414 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 TOP3AQ13472 1001 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 NTRK3Q16288 839 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 FXNQ16595 210 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 USP39Q53GS9 565 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 LBX2Q6XYB7 198 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 IFNL2Q8IZJ0 200 aa5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 MRRFQ96E11 262 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-206ENST00000581631 MATN2O00339 956 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 COL6A2P12110 1019 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 RNF151Q2KHN1 245 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 MAMDC4Q6UXC1 1216 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 EEPD1Q7L9B9 569 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 HOMEZQ8IX15 550 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 GIMAP8Q8ND71 665 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 EXTL1Q92935 676 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 TACO1Q9BSH4 297 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-206ENST00000581631 ZNF202O95125 648 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 POLD1P28340 1107 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 PTH1RQ03431 593 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 ABHD18Q0P651 414 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 NRN1LQ496H8 165 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 KCNT2Q6UVM3 1135 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 USP53Q70EK8 1073 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 KCTD1Q719H9 257 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 SH3RF2Q8TEC5 729 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 CARD11Q9BXL7 1154 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 CCSER2Q9H7U1 834 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 OAZ3Q9UMX2 235 aa5.85□□□□□ -1.47
SMCHD1-206ENST00000581631 TCRBV5S4A2TA0A5A2 114 aa5.84□□□□□ -1.47
SMCHD1-206ENST00000581631 DGCR2P98153 550 aa5.84□□□□□ -1.47
SMCHD1-206ENST00000581631 SMN1Q16637 294 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms